Gene : Glyma.20G185400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34359:SF1 - CLAVATA3/ESR (CLE)-RELATED PROTEIN 11-RELATED Genomic Order:  1854
Name:  ? Glyma.20G185400 Secondary Identifier:  ? PAC:30521266
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G185400 0.5kb upstream 0.5kb upstream 1312 true Chr20: 42379994-42381305 Glycine max
Glyma.20G185400 0.5kb upstream 0.5kb upstream 500 false Chr20: 42380806-42381305 Glycine max
Glyma.20G185400 0.5kb downstream 0.5kb downstream 1312 true Chr20: 42379494-42380805 Glycine max
Glyma.20G185400 0.5kb downstream 0.5kb downstream 500 false Chr20: 42379494-42379993 Glycine max
Glyma.20G185400 1.0kb upstream 1.0kb upstream 1812 true Chr20: 42379994-42381805 Glycine max
Glyma.20G185400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42380806-42381805 Glycine max
Glyma.20G185400 1.0kb downstream 1.0kb downstream 1812 true Chr20: 42378994-42380805 Glycine max
Glyma.20G185400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42378994-42379993 Glycine max
Glyma.20G185400 2.0kb upstream 2.0kb upstream 2812 true Chr20: 42379994-42382805 Glycine max
Glyma.20G185400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42380806-42382805 Glycine max
Glyma.20G185400 2.0kb downstream 2.0kb downstream 2812 true Chr20: 42377994-42380805 Glycine max
Glyma.20G185400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42377994-42379993 Glycine max
Glyma.20G185400 5.0kb upstream 5.0kb upstream 5812 true Chr20: 42379994-42385805 Glycine max
Glyma.20G185400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42380806-42385805 Glycine max
Glyma.20G185400 5.0kb downstream 5.0kb downstream 5812 true Chr20: 42374994-42380805 Glycine max
Glyma.20G185400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42374994-42379993 Glycine max
Glyma.20G185400 10.0kb upstream 10.0kb upstream 10812 true Chr20: 42379994-42390805 Glycine max
Glyma.20G185400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42380806-42390805 Glycine max
Glyma.20G185400 10.0kb downstream 10.0kb downstream 10812 true Chr20: 42369994-42380805 Glycine max
Glyma.20G185400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42369994-42379993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315163 5265 Fabidae View MSA
124068823 5270 Rosid View MSA
123750577 5271 Pentapetalae View MSA
122796382 5272 Eudicot View MSA
122045247 5273 Angiosperm View MSA
121310424 5274 Embryophyte View MSA
123347912 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.164092 0.0 0.668478 Low Low
cufflinks 0.535758 0.0 2.08086    
cufflinks 0.588882 0.0 2.28053    
cufflinks 0.0648183 0.0 0.280765 Low Low
cufflinks 2.03262 0.0 7.42699    
cufflinks 2.04342 0.0 7.46437    
cufflinks 0.320881 0.0 1.27185    
cufflinks 8.65781 0.0 27.2248   High
cufflinks 2.31322 0.0 8.36863    
cufflinks 1.332       High
cufflinks 0.094       Low
cufflinks 0.193        
cufflinks 1.834       High
cufflinks 1.205       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.349        
cufflinks 0.151        
cufflinks 0.379        
cufflinks 0.265        
cufflinks 0.331        
cufflinks 0.129       Low
cufflinks 0.349        
cufflinks 0.391        
cufflinks 0.096       Low
cufflinks 0.376        
cufflinks 0.243        

0 Strain