Gene : Glyma.20G185800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31079:SF9 - NAC DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  1858
Name:  ? Glyma.20G185800 Secondary Identifier:  ? PAC:30520406
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G185800 0.5kb upstream 0.5kb upstream 5422 true Chr20: 42437978-42443399 Glycine max
Glyma.20G185800 0.5kb upstream 0.5kb upstream 500 false Chr20: 42437978-42438477 Glycine max
Glyma.20G185800 0.5kb downstream 0.5kb downstream 5422 true Chr20: 42438478-42443899 Glycine max
Glyma.20G185800 0.5kb downstream 0.5kb downstream 500 false Chr20: 42443400-42443899 Glycine max
Glyma.20G185800 1.0kb upstream 1.0kb upstream 5922 true Chr20: 42437478-42443399 Glycine max
Glyma.20G185800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42437478-42438477 Glycine max
Glyma.20G185800 1.0kb downstream 1.0kb downstream 5922 true Chr20: 42438478-42444399 Glycine max
Glyma.20G185800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42443400-42444399 Glycine max
Glyma.20G185800 2.0kb upstream 2.0kb upstream 6922 true Chr20: 42436478-42443399 Glycine max
Glyma.20G185800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42436478-42438477 Glycine max
Glyma.20G185800 2.0kb downstream 2.0kb downstream 6922 true Chr20: 42438478-42445399 Glycine max
Glyma.20G185800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42443400-42445399 Glycine max
Glyma.20G185800 5.0kb upstream 5.0kb upstream 9922 true Chr20: 42433478-42443399 Glycine max
Glyma.20G185800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42433478-42438477 Glycine max
Glyma.20G185800 5.0kb downstream 5.0kb downstream 9922 true Chr20: 42438478-42448399 Glycine max
Glyma.20G185800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42443400-42448399 Glycine max
Glyma.20G185800 10.0kb upstream 10.0kb upstream 14922 true Chr20: 42428478-42443399 Glycine max
Glyma.20G185800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42428478-42438477 Glycine max
Glyma.20G185800 10.0kb downstream 10.0kb downstream 14922 true Chr20: 42438478-42453399 Glycine max
Glyma.20G185800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42443400-42453399 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309660 5265 Fabidae View MSA
124068274 5270 Rosid View MSA
123741420 5271 Pentapetalae View MSA
122787811 5272 Eudicot View MSA
122048961 5273 Angiosperm View MSA
121311189 5274 Embryophyte View MSA
123348518 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.227341 0.0 1.10218   Low
cufflinks 4.95763 0.0 20.9356   High
cufflinks 0.62569 0.0 3.77995   Low
cufflinks 1.23575 0.0 5.23148    
cufflinks 2.693 0.0 14.0296    
cufflinks 3.01935 0.0 9.88115    
cufflinks 2.48518 0.0 13.4375    
cufflinks 1.83768 0.0 10.6923    
cufflinks 2.53964 0.0 13.3805    
cufflinks 0.226        
cufflinks 0.101       Low
cufflinks 0.28        
cufflinks 0.578       High
cufflinks 0.741       High
cufflinks 0.059       Low
cufflinks 0.433        
cufflinks 0.071       Low
cufflinks 0.196        
cufflinks 0.888       High
cufflinks 0.346        
cufflinks 0.141        
cufflinks 0.434        
cufflinks 0.524        
cufflinks 0.111       Low
cufflinks 0.335        
cufflinks 0.178        

0 Strain