Gene : Glyma.20G186400 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  1864
Name:  ? Glyma.20G186400 Secondary Identifier:  ? PAC:30523421
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G186400 0.5kb upstream 0.5kb upstream 2122 true Chr20: 42501931-42504052 Glycine max
Glyma.20G186400 0.5kb upstream 0.5kb upstream 500 false Chr20: 42503553-42504052 Glycine max
Glyma.20G186400 0.5kb downstream 0.5kb downstream 2122 true Chr20: 42501431-42503552 Glycine max
Glyma.20G186400 0.5kb downstream 0.5kb downstream 500 false Chr20: 42501431-42501930 Glycine max
Glyma.20G186400 1.0kb upstream 1.0kb upstream 2622 true Chr20: 42501931-42504552 Glycine max
Glyma.20G186400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42503553-42504552 Glycine max
Glyma.20G186400 1.0kb downstream 1.0kb downstream 2622 true Chr20: 42500931-42503552 Glycine max
Glyma.20G186400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42500931-42501930 Glycine max
Glyma.20G186400 2.0kb upstream 2.0kb upstream 3622 true Chr20: 42501931-42505552 Glycine max
Glyma.20G186400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42503553-42505552 Glycine max
Glyma.20G186400 2.0kb downstream 2.0kb downstream 3622 true Chr20: 42499931-42503552 Glycine max
Glyma.20G186400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42499931-42501930 Glycine max
Glyma.20G186400 5.0kb upstream 5.0kb upstream 6622 true Chr20: 42501931-42508552 Glycine max
Glyma.20G186400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42503553-42508552 Glycine max
Glyma.20G186400 5.0kb downstream 5.0kb downstream 6622 true Chr20: 42496931-42503552 Glycine max
Glyma.20G186400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42496931-42501930 Glycine max
Glyma.20G186400 10.0kb upstream 10.0kb upstream 11622 true Chr20: 42501931-42513552 Glycine max
Glyma.20G186400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42503553-42513552 Glycine max
Glyma.20G186400 10.0kb downstream 10.0kb downstream 11622 true Chr20: 42491931-42503552 Glycine max
Glyma.20G186400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42491931-42501930 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255313 5265 Fabidae View MSA
124071886 5270 Rosid View MSA
123745517 5271 Pentapetalae View MSA
122795224 5272 Eudicot View MSA
122047966 5273 Angiosperm View MSA
121348294 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.111436 0.0 0.446621 Low  
cufflinks 0.176453 0.0 0.694737 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0325528 0.0 0.14056 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.115771 0.0 0.463098 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0188318 0.0 0.085176 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.311        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.913       High
cufflinks 0.162        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain