Gene : Glyma.20G186200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31140:SF3 - AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED Genomic Order:  1862
Name:  ? Glyma.20G186200 Secondary Identifier:  ? PAC:30523325
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G186200 0.5kb upstream 0.5kb upstream 1693 true Chr20: 42482296-42483988 Glycine max
Glyma.20G186200 0.5kb upstream 0.5kb upstream 500 false Chr20: 42482296-42482795 Glycine max
Glyma.20G186200 0.5kb downstream 0.5kb downstream 1693 true Chr20: 42482796-42484488 Glycine max
Glyma.20G186200 0.5kb downstream 0.5kb downstream 500 false Chr20: 42483989-42484488 Glycine max
Glyma.20G186200 1.0kb upstream 1.0kb upstream 2193 true Chr20: 42481796-42483988 Glycine max
Glyma.20G186200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42481796-42482795 Glycine max
Glyma.20G186200 1.0kb downstream 1.0kb downstream 2193 true Chr20: 42482796-42484988 Glycine max
Glyma.20G186200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42483989-42484988 Glycine max
Glyma.20G186200 2.0kb upstream 2.0kb upstream 3193 true Chr20: 42480796-42483988 Glycine max
Glyma.20G186200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42480796-42482795 Glycine max
Glyma.20G186200 2.0kb downstream 2.0kb downstream 3193 true Chr20: 42482796-42485988 Glycine max
Glyma.20G186200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42483989-42485988 Glycine max
Glyma.20G186200 5.0kb upstream 5.0kb upstream 6193 true Chr20: 42477796-42483988 Glycine max
Glyma.20G186200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42477796-42482795 Glycine max
Glyma.20G186200 5.0kb downstream 5.0kb downstream 6193 true Chr20: 42482796-42488988 Glycine max
Glyma.20G186200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42483989-42488988 Glycine max
Glyma.20G186200 10.0kb upstream 10.0kb upstream 11193 true Chr20: 42472796-42483988 Glycine max
Glyma.20G186200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42472796-42482795 Glycine max
Glyma.20G186200 10.0kb downstream 10.0kb downstream 11193 true Chr20: 42482796-42493988 Glycine max
Glyma.20G186200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42483989-42493988 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296604 5265 Fabidae View MSA
124042753 5270 Rosid View MSA
123612922 5271 Pentapetalae View MSA
122647401 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.72067 0.0 21.9696   High
cufflinks 0.18684 0.0 0.732513 Low  
cufflinks 0.0490816 0.0 0.205461 Low  
cufflinks 0.0381193 0.0 0.161388 Low Low
cufflinks 0.36964 0.0 1.39891    
cufflinks 0.301691 0.0 1.15571    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.362437 0.0 1.38165    
cufflinks 0.0826053 0.0 0.333136 Low  
cufflinks 5.957        
cufflinks 22.983     High  
cufflinks 0.675       Low
cufflinks 0.368       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.275     High  
cufflinks 10.895     High  
cufflinks 97.645     High High
cufflinks 0.257       Low
cufflinks 0.207       Low
cufflinks 13.369     High  
cufflinks 50.425     High High
cufflinks 5.282        
cufflinks 3.126        
cufflinks 11.057     High  
cufflinks 3.729        
cufflinks 40.01     High High

0 Strain