Gene : Glyma.20G178100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR16127 - TAXILIN Genomic Order:  1781
Name:  ? Glyma.20G178100 Secondary Identifier:  ? PAC:30519832
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G178100 0.5kb upstream 0.5kb upstream 10272 true Chr20: 41552384-41562655 Glycine max
Glyma.20G178100 0.5kb upstream 0.5kb upstream 500 false Chr20: 41552384-41552883 Glycine max
Glyma.20G178100 0.5kb downstream 0.5kb downstream 10272 true Chr20: 41552884-41563155 Glycine max
Glyma.20G178100 0.5kb downstream 0.5kb downstream 500 false Chr20: 41562656-41563155 Glycine max
Glyma.20G178100 1.0kb upstream 1.0kb upstream 10772 true Chr20: 41551884-41562655 Glycine max
Glyma.20G178100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41551884-41552883 Glycine max
Glyma.20G178100 1.0kb downstream 1.0kb downstream 10772 true Chr20: 41552884-41563655 Glycine max
Glyma.20G178100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41562656-41563655 Glycine max
Glyma.20G178100 2.0kb upstream 2.0kb upstream 11772 true Chr20: 41550884-41562655 Glycine max
Glyma.20G178100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41550884-41552883 Glycine max
Glyma.20G178100 2.0kb downstream 2.0kb downstream 11772 true Chr20: 41552884-41564655 Glycine max
Glyma.20G178100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41562656-41564655 Glycine max
Glyma.20G178100 5.0kb upstream 5.0kb upstream 14772 true Chr20: 41547884-41562655 Glycine max
Glyma.20G178100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41547884-41552883 Glycine max
Glyma.20G178100 5.0kb downstream 5.0kb downstream 14772 true Chr20: 41552884-41567655 Glycine max
Glyma.20G178100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41562656-41567655 Glycine max
Glyma.20G178100 10.0kb upstream 10.0kb upstream 19772 true Chr20: 41542884-41562655 Glycine max
Glyma.20G178100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41542884-41552883 Glycine max
Glyma.20G178100 10.0kb downstream 10.0kb downstream 19772 true Chr20: 41552884-41572655 Glycine max
Glyma.20G178100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41562656-41572655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299725 5265 Fabidae View MSA
124064833 5270 Rosid View MSA
123742164 5271 Pentapetalae View MSA
122790090 5272 Eudicot View MSA
122042784 5273 Angiosperm View MSA
121348664 5274 Embryophyte View MSA
123425640 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.254 0.0 20.5829   Low
cufflinks 12.5542 0.0 44.1331   High
cufflinks 6.8366 0.0 25.5995   Low
cufflinks 9.22642 0.0 33.4691    
cufflinks 10.9734 0.0 39.0658    
cufflinks 11.8506 0.0 41.6966    
cufflinks 9.71889 0.0 29.947    
cufflinks 12.2321 0.0 36.6984    
cufflinks 9.59034 0.0 34.3324    
cufflinks 0.696        
cufflinks 0.364       Low
cufflinks 0.582        
cufflinks 0.939       High
cufflinks 1.104       High
cufflinks 0.49        
cufflinks 0.502        
cufflinks 0.346       Low
cufflinks 0.73        
cufflinks 0.799       High
cufflinks 0.43        
cufflinks 0.493        
cufflinks 0.483        
cufflinks 0.544        
cufflinks 0.448        
cufflinks 0.461        
cufflinks 0.591        

0 Strain