Gene : Glyma.20G178400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11079:SF98 - PROTEIN ZK287.7 Genomic Order:  1784
Name:  ? Glyma.20G178400 Secondary Identifier:  ? PAC:30523243
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G178400 0.5kb upstream 0.5kb upstream 7019 true Chr20: 41578130-41585148 Glycine max
Glyma.20G178400 0.5kb upstream 0.5kb upstream 500 false Chr20: 41578130-41578629 Glycine max
Glyma.20G178400 0.5kb downstream 0.5kb downstream 7019 true Chr20: 41578630-41585648 Glycine max
Glyma.20G178400 0.5kb downstream 0.5kb downstream 500 false Chr20: 41585149-41585648 Glycine max
Glyma.20G178400 1.0kb upstream 1.0kb upstream 7519 true Chr20: 41577630-41585148 Glycine max
Glyma.20G178400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41577630-41578629 Glycine max
Glyma.20G178400 1.0kb downstream 1.0kb downstream 7519 true Chr20: 41578630-41586148 Glycine max
Glyma.20G178400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41585149-41586148 Glycine max
Glyma.20G178400 2.0kb upstream 2.0kb upstream 8519 true Chr20: 41576630-41585148 Glycine max
Glyma.20G178400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41576630-41578629 Glycine max
Glyma.20G178400 2.0kb downstream 2.0kb downstream 8519 true Chr20: 41578630-41587148 Glycine max
Glyma.20G178400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41585149-41587148 Glycine max
Glyma.20G178400 5.0kb upstream 5.0kb upstream 11519 true Chr20: 41573630-41585148 Glycine max
Glyma.20G178400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41573630-41578629 Glycine max
Glyma.20G178400 5.0kb downstream 5.0kb downstream 11519 true Chr20: 41578630-41590148 Glycine max
Glyma.20G178400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41585149-41590148 Glycine max
Glyma.20G178400 10.0kb upstream 10.0kb upstream 16519 true Chr20: 41568630-41585148 Glycine max
Glyma.20G178400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41568630-41578629 Glycine max
Glyma.20G178400 10.0kb downstream 10.0kb downstream 16519 true Chr20: 41578630-41595148 Glycine max
Glyma.20G178400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41585149-41595148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301342 5265 Fabidae View MSA
124066425 5270 Rosid View MSA
123737257 5271 Pentapetalae View MSA
122788829 5272 Eudicot View MSA
122047050 5273 Angiosperm View MSA
121344286 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.01402 0.0 19.7649    
cufflinks 8.40698 0.0 23.2777   High
cufflinks 7.9102 0.0 21.9853   High
cufflinks 7.31807 0.0 20.5033    
cufflinks 5.18418 0.0 15.1424   Low
cufflinks 6.66563 0.0 18.897    
cufflinks 6.06505 0.0 17.4155    
cufflinks 6.69333 0.0 18.9252    
cufflinks 5.8237 0.0 16.7608    
cufflinks 1.207        
cufflinks 0.835       Low
cufflinks 1.865       High
cufflinks 1.328        
cufflinks 1.181        
cufflinks 1.146        
cufflinks 1.686        
cufflinks 0.756       Low
cufflinks 1.914       High
cufflinks 2.232       High
cufflinks 1.468        
cufflinks 1.003        
cufflinks 1.756        
cufflinks 1.733        
cufflinks 1.098        
cufflinks 1.488        
cufflinks 0.921       Low

0 Strain