Gene : Glyma.20G178900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24067//PTHR24067:SF121 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  1789
Name:  ? Glyma.20G178900 Secondary Identifier:  ? PAC:30519610
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G178900 0.5kb upstream 0.5kb upstream 3837 true Chr20: 41625783-41629619 Glycine max
Glyma.20G178900 0.5kb upstream 0.5kb upstream 500 false Chr20: 41625783-41626282 Glycine max
Glyma.20G178900 0.5kb downstream 0.5kb downstream 3837 true Chr20: 41626283-41630119 Glycine max
Glyma.20G178900 0.5kb downstream 0.5kb downstream 500 false Chr20: 41629620-41630119 Glycine max
Glyma.20G178900 1.0kb upstream 1.0kb upstream 4337 true Chr20: 41625283-41629619 Glycine max
Glyma.20G178900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41625283-41626282 Glycine max
Glyma.20G178900 1.0kb downstream 1.0kb downstream 4337 true Chr20: 41626283-41630619 Glycine max
Glyma.20G178900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41629620-41630619 Glycine max
Glyma.20G178900 2.0kb upstream 2.0kb upstream 5337 true Chr20: 41624283-41629619 Glycine max
Glyma.20G178900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41624283-41626282 Glycine max
Glyma.20G178900 2.0kb downstream 2.0kb downstream 5337 true Chr20: 41626283-41631619 Glycine max
Glyma.20G178900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41629620-41631619 Glycine max
Glyma.20G178900 5.0kb upstream 5.0kb upstream 8337 true Chr20: 41621283-41629619 Glycine max
Glyma.20G178900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41621283-41626282 Glycine max
Glyma.20G178900 5.0kb downstream 5.0kb downstream 8337 true Chr20: 41626283-41634619 Glycine max
Glyma.20G178900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41629620-41634619 Glycine max
Glyma.20G178900 10.0kb upstream 10.0kb upstream 13337 true Chr20: 41616283-41629619 Glycine max
Glyma.20G178900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41616283-41626282 Glycine max
Glyma.20G178900 10.0kb downstream 10.0kb downstream 13337 true Chr20: 41626283-41639619 Glycine max
Glyma.20G178900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41629620-41639619 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304835 5265 Fabidae View MSA
124070103 5270 Rosid View MSA
123742305 5271 Pentapetalae View MSA
122795620 5272 Eudicot View MSA
122049556 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3133 0.0 61.7532    
cufflinks 11.189 0.0 62.8348    
cufflinks 16.184 0.0 87.7935   High
cufflinks 11.8181 0.0 65.7236    
cufflinks 11.2265 0.0 62.5346    
cufflinks 13.8981 0.0 68.8036    
cufflinks 9.9447 0.0 52.2845    
cufflinks 16.8652 0.0 78.914   High
cufflinks 8.12849 0.0 47.6596   Low
cufflinks 0.403        
cufflinks 0.457        
cufflinks 0.541       High
cufflinks 0.471        
cufflinks 0.483        
cufflinks 0.197       Low
cufflinks 0.455        
cufflinks 0.325       Low
cufflinks 0.407        
cufflinks 0.449        
cufflinks 0.424        
cufflinks 0.441        
cufflinks 0.45        
cufflinks 0.407        
cufflinks 0.513        
cufflinks 0.494        
cufflinks 0.405        

0 Strain