Gene : Glyma.20G179000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF08551 - Eukaryotic integral membrane protein (DUF1751) (DUF1751) Genomic Order:  1790
Name:  ? Glyma.20G179000 Secondary Identifier:  ? PAC:30523449
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G179000 0.5kb upstream 0.5kb upstream 2137 true Chr20: 41630613-41632749 Glycine max
Glyma.20G179000 0.5kb upstream 0.5kb upstream 500 false Chr20: 41632250-41632749 Glycine max
Glyma.20G179000 0.5kb downstream 0.5kb downstream 2137 true Chr20: 41630113-41632249 Glycine max
Glyma.20G179000 0.5kb downstream 0.5kb downstream 500 false Chr20: 41630113-41630612 Glycine max
Glyma.20G179000 1.0kb upstream 1.0kb upstream 2637 true Chr20: 41630613-41633249 Glycine max
Glyma.20G179000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41632250-41633249 Glycine max
Glyma.20G179000 1.0kb downstream 1.0kb downstream 2637 true Chr20: 41629613-41632249 Glycine max
Glyma.20G179000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41629613-41630612 Glycine max
Glyma.20G179000 2.0kb upstream 2.0kb upstream 3637 true Chr20: 41630613-41634249 Glycine max
Glyma.20G179000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41632250-41634249 Glycine max
Glyma.20G179000 2.0kb downstream 2.0kb downstream 3637 true Chr20: 41628613-41632249 Glycine max
Glyma.20G179000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41628613-41630612 Glycine max
Glyma.20G179000 5.0kb upstream 5.0kb upstream 6637 true Chr20: 41630613-41637249 Glycine max
Glyma.20G179000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41632250-41637249 Glycine max
Glyma.20G179000 5.0kb downstream 5.0kb downstream 6637 true Chr20: 41625613-41632249 Glycine max
Glyma.20G179000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41625613-41630612 Glycine max
Glyma.20G179000 10.0kb upstream 10.0kb upstream 11637 true Chr20: 41630613-41642249 Glycine max
Glyma.20G179000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41632250-41642249 Glycine max
Glyma.20G179000 10.0kb downstream 10.0kb downstream 11637 true Chr20: 41620613-41632249 Glycine max
Glyma.20G179000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41620613-41630612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237849 5265 Fabidae Singleton cluster - no MSA
124042401 5270 Rosid View MSA
123748664 5271 Pentapetalae View MSA
122792028 5272 Eudicot View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.885077 0.0 3.40001   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.137092 0.0 0.571047 Low  
cufflinks 0.0435525 0.0 0.200088 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.411287 0.0 1.63018    
cufflinks 0.34722 0.0 1.3825    
cufflinks 0.0504343 0.0 0.228114 Low Low
cufflinks 0.454       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.095     Low  
cufflinks 0.154        
cufflinks 0.287        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.164        
cufflinks 0.02     Low Low
cufflinks 0.323        
cufflinks 1.083       High
cufflinks 0.129        
cufflinks 0.023     Low Low
cufflinks 0.139        
cufflinks 0.157        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.144        
cufflinks 0.023     Low Low

0 Strain