Gene : Glyma.20G181200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20922:SF13 - DNL-TYPE ZINC FINGER PROTEIN Genomic Order:  1812
Name:  ? Glyma.20G181200 Secondary Identifier:  ? PAC:30519585
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G181200 0.5kb upstream 0.5kb upstream 3284 true Chr20: 41925964-41929247 Glycine max
Glyma.20G181200 0.5kb upstream 0.5kb upstream 500 false Chr20: 41925964-41926463 Glycine max
Glyma.20G181200 0.5kb downstream 0.5kb downstream 3284 true Chr20: 41926464-41929747 Glycine max
Glyma.20G181200 0.5kb downstream 0.5kb downstream 500 false Chr20: 41929248-41929747 Glycine max
Glyma.20G181200 1.0kb upstream 1.0kb upstream 3784 true Chr20: 41925464-41929247 Glycine max
Glyma.20G181200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41925464-41926463 Glycine max
Glyma.20G181200 1.0kb downstream 1.0kb downstream 3784 true Chr20: 41926464-41930247 Glycine max
Glyma.20G181200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41929248-41930247 Glycine max
Glyma.20G181200 2.0kb upstream 2.0kb upstream 4784 true Chr20: 41924464-41929247 Glycine max
Glyma.20G181200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41924464-41926463 Glycine max
Glyma.20G181200 2.0kb downstream 2.0kb downstream 4784 true Chr20: 41926464-41931247 Glycine max
Glyma.20G181200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41929248-41931247 Glycine max
Glyma.20G181200 5.0kb upstream 5.0kb upstream 7784 true Chr20: 41921464-41929247 Glycine max
Glyma.20G181200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41921464-41926463 Glycine max
Glyma.20G181200 5.0kb downstream 5.0kb downstream 7784 true Chr20: 41926464-41934247 Glycine max
Glyma.20G181200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41929248-41934247 Glycine max
Glyma.20G181200 10.0kb upstream 10.0kb upstream 12784 true Chr20: 41916464-41929247 Glycine max
Glyma.20G181200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41916464-41926463 Glycine max
Glyma.20G181200 10.0kb downstream 10.0kb downstream 12784 true Chr20: 41926464-41939247 Glycine max
Glyma.20G181200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41929248-41939247 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312568 5265 Fabidae View MSA
124064437 5270 Rosid View MSA
123738785 5271 Pentapetalae View MSA
122790651 5272 Eudicot View MSA
122044958 5273 Angiosperm View MSA
121348718 5274 Embryophyte View MSA
123424658 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.95899 0.0 9.58297    
cufflinks 1.79863 0.0 6.18658   Low
cufflinks 1.38745 0.0 4.87844   Low
cufflinks 2.22967 0.0 7.47256    
cufflinks 2.56236 0.0 8.46377    
cufflinks 2.5992 0.0 8.56502    
cufflinks 3.6208 0.0 11.3739   High
cufflinks 2.66181 0.0 8.71107    
cufflinks 3.56482 0.0 11.22   High
cufflinks 0.519        
cufflinks 0.868        
cufflinks 0.799        
cufflinks 1.064        
cufflinks 1.357       High
cufflinks 2.444       High
cufflinks 0.388       Low
cufflinks 0.567        
cufflinks 0.724        
cufflinks 0.801        
cufflinks 0.468        
cufflinks 0.524        
cufflinks 0.567        
cufflinks 0.524        
cufflinks 0.724        
cufflinks 0.419       Low
cufflinks 0.679        

0 Strain