Gene : Glyma.20G173200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Genomic Order:  1732
Name:  ? Glyma.20G173200 Secondary Identifier:  ? PAC:30521077
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6352 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G173200 0.5kb upstream 0.5kb upstream 11050 true Chr20: 41086856-41097905 Glycine max
Glyma.20G173200 0.5kb upstream 0.5kb upstream 500 false Chr20: 41086856-41087355 Glycine max
Glyma.20G173200 0.5kb downstream 0.5kb downstream 11050 true Chr20: 41087356-41098405 Glycine max
Glyma.20G173200 0.5kb downstream 0.5kb downstream 500 false Chr20: 41097906-41098405 Glycine max
Glyma.20G173200 1.0kb upstream 1.0kb upstream 11550 true Chr20: 41086356-41097905 Glycine max
Glyma.20G173200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41086356-41087355 Glycine max
Glyma.20G173200 1.0kb downstream 1.0kb downstream 11550 true Chr20: 41087356-41098905 Glycine max
Glyma.20G173200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41097906-41098905 Glycine max
Glyma.20G173200 2.0kb upstream 2.0kb upstream 12550 true Chr20: 41085356-41097905 Glycine max
Glyma.20G173200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41085356-41087355 Glycine max
Glyma.20G173200 2.0kb downstream 2.0kb downstream 12550 true Chr20: 41087356-41099905 Glycine max
Glyma.20G173200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41097906-41099905 Glycine max
Glyma.20G173200 5.0kb upstream 5.0kb upstream 15550 true Chr20: 41082356-41097905 Glycine max
Glyma.20G173200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41082356-41087355 Glycine max
Glyma.20G173200 5.0kb downstream 5.0kb downstream 15550 true Chr20: 41087356-41102905 Glycine max
Glyma.20G173200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41097906-41102905 Glycine max
Glyma.20G173200 10.0kb upstream 10.0kb upstream 20550 true Chr20: 41077356-41097905 Glycine max
Glyma.20G173200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41077356-41087355 Glycine max
Glyma.20G173200 10.0kb downstream 10.0kb downstream 20550 true Chr20: 41087356-41107905 Glycine max
Glyma.20G173200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41097906-41107905 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301793 5265 Fabidae View MSA
124065286 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.98287 0.0 13.9557    
cufflinks 3.23892 0.0 12.8682    
cufflinks 10.6925 0.0 49.894   High
cufflinks 4.80173 0.0 21.6478    
cufflinks 2.852 0.0 13.3527    
cufflinks 4.83312 0.0 21.53    
cufflinks 3.06971 0.0 12.409    
cufflinks 3.9936 0.0 18.0114    
cufflinks 3.55615 0.0 13.9035    
cufflinks 0.461        
cufflinks 0.981       High
cufflinks 0.865       High
cufflinks 0.328       Low
cufflinks 0.306       Low
cufflinks 0.499        
cufflinks 0.486        
cufflinks 0.552        
cufflinks 0.534        
cufflinks 0.563        
cufflinks 0.537        
cufflinks 0.771        
cufflinks 0.564        
cufflinks 0.644        
cufflinks 1.441       High
cufflinks 0.495        
cufflinks 0.648        

0 Strain