Gene : Glyma.20G174000 G. max Wm82.a2.v1
Defline:  (1 of 30) PF05003 - Protein of unknown function (DUF668) (DUF668) Genomic Order:  1740
Name:  ? Glyma.20G174000 Secondary Identifier:  ? PAC:30520399
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G174000 0.5kb upstream 0.5kb upstream 12728 true Chr20: 41142603-41155330 Glycine max
Glyma.20G174000 0.5kb upstream 0.5kb upstream 500 false Chr20: 41142603-41143102 Glycine max
Glyma.20G174000 0.5kb downstream 0.5kb downstream 12728 true Chr20: 41143103-41155830 Glycine max
Glyma.20G174000 0.5kb downstream 0.5kb downstream 500 false Chr20: 41155331-41155830 Glycine max
Glyma.20G174000 1.0kb upstream 1.0kb upstream 13228 true Chr20: 41142103-41155330 Glycine max
Glyma.20G174000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41142103-41143102 Glycine max
Glyma.20G174000 1.0kb downstream 1.0kb downstream 13228 true Chr20: 41143103-41156330 Glycine max
Glyma.20G174000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41155331-41156330 Glycine max
Glyma.20G174000 2.0kb upstream 2.0kb upstream 14228 true Chr20: 41141103-41155330 Glycine max
Glyma.20G174000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41141103-41143102 Glycine max
Glyma.20G174000 2.0kb downstream 2.0kb downstream 14228 true Chr20: 41143103-41157330 Glycine max
Glyma.20G174000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41155331-41157330 Glycine max
Glyma.20G174000 5.0kb upstream 5.0kb upstream 17228 true Chr20: 41138103-41155330 Glycine max
Glyma.20G174000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41138103-41143102 Glycine max
Glyma.20G174000 5.0kb downstream 5.0kb downstream 17228 true Chr20: 41143103-41160330 Glycine max
Glyma.20G174000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41155331-41160330 Glycine max
Glyma.20G174000 10.0kb upstream 10.0kb upstream 22228 true Chr20: 41133103-41155330 Glycine max
Glyma.20G174000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41133103-41143102 Glycine max
Glyma.20G174000 10.0kb downstream 10.0kb downstream 22228 true Chr20: 41143103-41165330 Glycine max
Glyma.20G174000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41155331-41165330 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305544 5265 Fabidae View MSA
124062603 5270 Rosid View MSA
123740841 5271 Pentapetalae View MSA
122789815 5272 Eudicot View MSA
122047946 5273 Angiosperm View MSA
121344073 5274 Embryophyte View MSA
123379968 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.11747 0.0 21.8228   Low
cufflinks 5.95597 0.0 30.272    
cufflinks 4.22551 0.0 19.4838   Low
cufflinks 11.0407 0.0 52.7918   High
cufflinks 6.14513 0.0 30.5902    
cufflinks 4.91136 0.0 20.5049    
cufflinks 11.6954 0.0 57.1052   High
cufflinks 7.35351 0.0 32.6159    
cufflinks 5.81171 0.0 22.2344    
cufflinks 0.49        
cufflinks 0.105       Low
cufflinks 0.38        
cufflinks 0.393        
cufflinks 0.41        
cufflinks 0.18        
cufflinks 0.291        
cufflinks 0.633       High
cufflinks 0.528       High
cufflinks 0.504        
cufflinks 0.308        
cufflinks 0.13       Low
cufflinks 0.345        
cufflinks 0.391        
cufflinks 0.107       Low
cufflinks 0.316        
cufflinks 0.292        

0 Strain