Gene : Glyma.20G174400 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase Genomic Order:  1744
Name:  ? Glyma.20G174400 Secondary Identifier:  ? PAC:30520468
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G174400 0.5kb upstream 0.5kb upstream 8529 true Chr20: 41171544-41180072 Glycine max
Glyma.20G174400 0.5kb upstream 0.5kb upstream 500 false Chr20: 41171544-41172043 Glycine max
Glyma.20G174400 0.5kb downstream 0.5kb downstream 8529 true Chr20: 41172044-41180572 Glycine max
Glyma.20G174400 0.5kb downstream 0.5kb downstream 500 false Chr20: 41180073-41180572 Glycine max
Glyma.20G174400 1.0kb upstream 1.0kb upstream 9029 true Chr20: 41171044-41180072 Glycine max
Glyma.20G174400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41171044-41172043 Glycine max
Glyma.20G174400 1.0kb downstream 1.0kb downstream 9029 true Chr20: 41172044-41181072 Glycine max
Glyma.20G174400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41180073-41181072 Glycine max
Glyma.20G174400 2.0kb upstream 2.0kb upstream 10029 true Chr20: 41170044-41180072 Glycine max
Glyma.20G174400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41170044-41172043 Glycine max
Glyma.20G174400 2.0kb downstream 2.0kb downstream 10029 true Chr20: 41172044-41182072 Glycine max
Glyma.20G174400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41180073-41182072 Glycine max
Glyma.20G174400 5.0kb upstream 5.0kb upstream 13029 true Chr20: 41167044-41180072 Glycine max
Glyma.20G174400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41167044-41172043 Glycine max
Glyma.20G174400 5.0kb downstream 5.0kb downstream 13029 true Chr20: 41172044-41185072 Glycine max
Glyma.20G174400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41180073-41185072 Glycine max
Glyma.20G174400 10.0kb upstream 10.0kb upstream 18029 true Chr20: 41162044-41180072 Glycine max
Glyma.20G174400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41162044-41172043 Glycine max
Glyma.20G174400 10.0kb downstream 10.0kb downstream 18029 true Chr20: 41172044-41190072 Glycine max
Glyma.20G174400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41180073-41190072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303528 5265 Fabidae View MSA
124064235 5270 Rosid View MSA
123751527 5271 Pentapetalae View MSA
122793185 5272 Eudicot View MSA
122043482 5273 Angiosperm View MSA
121344625 5274 Embryophyte View MSA
123428724 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.82736 0.0 11.815    
cufflinks 3.62383 0.0 13.8959   High
cufflinks 2.2807 0.0 9.90115    
cufflinks 3.48507 0.0 12.48   High
cufflinks 2.63925 0.0 11.1348    
cufflinks 1.60585 0.0 5.57062   Low
cufflinks 3.20032 0.0 11.9414    
cufflinks 2.73156 0.0 11.6546    
cufflinks 2.5289 0.0 16.2439    
cufflinks 0.31        
cufflinks 0.173       Low
cufflinks 0.475        
cufflinks 0.45        
cufflinks 0.44        
cufflinks 0.26        
cufflinks 0.486        
cufflinks 0.191       Low
cufflinks 0.446        
cufflinks 0.617       High
cufflinks 0.459        
cufflinks 0.18       Low
cufflinks 0.462        
cufflinks 0.542       High
cufflinks 0.215       Low
cufflinks 0.461        
cufflinks 0.209       Low

0 Strain