Gene : Glyma.20G174900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13043 - EXOCYST COMPLEX COMPONENT SEC5 Genomic Order:  1749
Name:  ? Glyma.20G174900 Secondary Identifier:  ? PAC:30519677
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G174900 0.5kb upstream 0.5kb upstream 17429 true Chr20: 41232248-41249676 Glycine max
Glyma.20G174900 0.5kb upstream 0.5kb upstream 500 false Chr20: 41249177-41249676 Glycine max
Glyma.20G174900 0.5kb downstream 0.5kb downstream 17429 true Chr20: 41231748-41249176 Glycine max
Glyma.20G174900 0.5kb downstream 0.5kb downstream 500 false Chr20: 41231748-41232247 Glycine max
Glyma.20G174900 1.0kb upstream 1.0kb upstream 17929 true Chr20: 41232248-41250176 Glycine max
Glyma.20G174900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41249177-41250176 Glycine max
Glyma.20G174900 1.0kb downstream 1.0kb downstream 17929 true Chr20: 41231248-41249176 Glycine max
Glyma.20G174900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41231248-41232247 Glycine max
Glyma.20G174900 2.0kb upstream 2.0kb upstream 18929 true Chr20: 41232248-41251176 Glycine max
Glyma.20G174900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41249177-41251176 Glycine max
Glyma.20G174900 2.0kb downstream 2.0kb downstream 18929 true Chr20: 41230248-41249176 Glycine max
Glyma.20G174900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41230248-41232247 Glycine max
Glyma.20G174900 5.0kb upstream 5.0kb upstream 21929 true Chr20: 41232248-41254176 Glycine max
Glyma.20G174900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41249177-41254176 Glycine max
Glyma.20G174900 5.0kb downstream 5.0kb downstream 21929 true Chr20: 41227248-41249176 Glycine max
Glyma.20G174900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41227248-41232247 Glycine max
Glyma.20G174900 10.0kb upstream 10.0kb upstream 26929 true Chr20: 41232248-41259176 Glycine max
Glyma.20G174900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41249177-41259176 Glycine max
Glyma.20G174900 10.0kb downstream 10.0kb downstream 26929 true Chr20: 41222248-41249176 Glycine max
Glyma.20G174900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41222248-41232247 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301493 5265 Fabidae View MSA
124062165 5270 Rosid View MSA
123739212 5271 Pentapetalae View MSA
122789529 5272 Eudicot View MSA
122043231 5273 Angiosperm View MSA
121349078 5274 Embryophyte View MSA
123426915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9085 0.0 59.4049    
cufflinks 9.35488 0.0 42.3303    
cufflinks 14.994 0.0 82.6049   High
cufflinks 10.2261 0.0 56.1497    
cufflinks 9.68793 0.0 44.4653    
cufflinks 8.01129 0.0 40.5886   Low
cufflinks 10.9812 0.0 50.1669    
cufflinks 8.98066 0.0 40.5332    
cufflinks 7.7976 0.0 40.2343   Low
cufflinks 0.465        
cufflinks 0.587       High
cufflinks 0.541        
cufflinks 0.416        
cufflinks 0.418        
cufflinks 0.422        
cufflinks 0.47        
cufflinks 0.244       Low
cufflinks 0.532        
cufflinks 0.508        
cufflinks 0.583       High
cufflinks 0.42        
cufflinks 0.53        
cufflinks 0.438        
cufflinks 0.489        
cufflinks 0.5        
cufflinks 0.334       Low

0 Strain