Gene : Glyma.20G174800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19241:SF225 - ABC TRANSPORTER G FAMILY MEMBER 25 Genomic Order:  1748
Name:  ? Glyma.20G174800 Secondary Identifier:  ? PAC:30519720
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G174800 0.5kb upstream 0.5kb upstream 8298 true Chr20: 41213657-41221954 Glycine max
Glyma.20G174800 0.5kb upstream 0.5kb upstream 500 false Chr20: 41221455-41221954 Glycine max
Glyma.20G174800 0.5kb downstream 0.5kb downstream 8298 true Chr20: 41213157-41221454 Glycine max
Glyma.20G174800 0.5kb downstream 0.5kb downstream 500 false Chr20: 41213157-41213656 Glycine max
Glyma.20G174800 1.0kb upstream 1.0kb upstream 8798 true Chr20: 41213657-41222454 Glycine max
Glyma.20G174800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41221455-41222454 Glycine max
Glyma.20G174800 1.0kb downstream 1.0kb downstream 8798 true Chr20: 41212657-41221454 Glycine max
Glyma.20G174800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41212657-41213656 Glycine max
Glyma.20G174800 2.0kb upstream 2.0kb upstream 9798 true Chr20: 41213657-41223454 Glycine max
Glyma.20G174800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41221455-41223454 Glycine max
Glyma.20G174800 2.0kb downstream 2.0kb downstream 9798 true Chr20: 41211657-41221454 Glycine max
Glyma.20G174800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41211657-41213656 Glycine max
Glyma.20G174800 5.0kb upstream 5.0kb upstream 12798 true Chr20: 41213657-41226454 Glycine max
Glyma.20G174800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41221455-41226454 Glycine max
Glyma.20G174800 5.0kb downstream 5.0kb downstream 12798 true Chr20: 41208657-41221454 Glycine max
Glyma.20G174800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41208657-41213656 Glycine max
Glyma.20G174800 10.0kb upstream 10.0kb upstream 17798 true Chr20: 41213657-41231454 Glycine max
Glyma.20G174800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41221455-41231454 Glycine max
Glyma.20G174800 10.0kb downstream 10.0kb downstream 17798 true Chr20: 41203657-41221454 Glycine max
Glyma.20G174800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41203657-41213656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299552 5265 Fabidae View MSA
124060664 5270 Rosid View MSA
123738017 5271 Pentapetalae View MSA
122789288 5272 Eudicot View MSA
122050234 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121348566 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38825 0.0 4.52185    
cufflinks 2.40604 0.0 7.25601    
cufflinks 1.68277 0.0 5.35104    
cufflinks 0.455223 0.0 1.65   Low
cufflinks 7.61432 0.0 20.4777   High
cufflinks 1.43254 0.0 4.63957    
cufflinks 0.904052 0.0 3.10116    
cufflinks 7.43097 0.0 20.0275   High
cufflinks 2.74777 0.0 8.11444    
cufflinks 1.064       High
cufflinks 0.091       Low
cufflinks 0.604        
cufflinks 1.35       High
cufflinks 0.604        
cufflinks 0.265        
cufflinks 0.349        
cufflinks 0.186        
cufflinks 0.559        
cufflinks 0.656        
cufflinks 0.361        
cufflinks 0.048     Low Low
cufflinks 0.393        
cufflinks 0.393        
cufflinks 0.1       Low
cufflinks 0.369        
cufflinks 0.148        

0 Strain