Gene : Glyma.20G175800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23201:SF7 - GIBBERELLIN-REGULATED PROTEIN 2-RELATED Genomic Order:  1758
Name:  ? Glyma.20G175800 Secondary Identifier:  ? PAC:30521637
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G175800 0.5kb upstream 0.5kb upstream 5816 true Chr20: 41315163-41320978 Glycine max
Glyma.20G175800 0.5kb upstream 0.5kb upstream 500 false Chr20: 41320479-41320978 Glycine max
Glyma.20G175800 0.5kb downstream 0.5kb downstream 5816 true Chr20: 41314663-41320478 Glycine max
Glyma.20G175800 0.5kb downstream 0.5kb downstream 500 false Chr20: 41314663-41315162 Glycine max
Glyma.20G175800 1.0kb upstream 1.0kb upstream 6316 true Chr20: 41315163-41321478 Glycine max
Glyma.20G175800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41320479-41321478 Glycine max
Glyma.20G175800 1.0kb downstream 1.0kb downstream 6316 true Chr20: 41314163-41320478 Glycine max
Glyma.20G175800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41314163-41315162 Glycine max
Glyma.20G175800 2.0kb upstream 2.0kb upstream 7316 true Chr20: 41315163-41322478 Glycine max
Glyma.20G175800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41320479-41322478 Glycine max
Glyma.20G175800 2.0kb downstream 2.0kb downstream 7316 true Chr20: 41313163-41320478 Glycine max
Glyma.20G175800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41313163-41315162 Glycine max
Glyma.20G175800 5.0kb upstream 5.0kb upstream 10316 true Chr20: 41315163-41325478 Glycine max
Glyma.20G175800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41320479-41325478 Glycine max
Glyma.20G175800 5.0kb downstream 5.0kb downstream 10316 true Chr20: 41310163-41320478 Glycine max
Glyma.20G175800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41310163-41315162 Glycine max
Glyma.20G175800 10.0kb upstream 10.0kb upstream 15316 true Chr20: 41315163-41330478 Glycine max
Glyma.20G175800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41320479-41330478 Glycine max
Glyma.20G175800 10.0kb downstream 10.0kb downstream 15316 true Chr20: 41305163-41320478 Glycine max
Glyma.20G175800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41305163-41315162 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250721 5265 Fabidae View MSA
124073806 5270 Rosid View MSA
123751873 5271 Pentapetalae View MSA
122795637 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.7247 0.0 37.5418    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0742268 0.0 0.316517 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.757        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.07        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.307     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain