Gene : Glyma.20G176800 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  1768
Name:  ? Glyma.20G176800 Secondary Identifier:  ? PAC:30520495
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G176800 0.5kb upstream 0.5kb upstream 2462 true Chr20: 41394073-41396534 Glycine max
Glyma.20G176800 0.5kb upstream 0.5kb upstream 500 false Chr20: 41396035-41396534 Glycine max
Glyma.20G176800 0.5kb downstream 0.5kb downstream 2462 true Chr20: 41393573-41396034 Glycine max
Glyma.20G176800 0.5kb downstream 0.5kb downstream 500 false Chr20: 41393573-41394072 Glycine max
Glyma.20G176800 1.0kb upstream 1.0kb upstream 2962 true Chr20: 41394073-41397034 Glycine max
Glyma.20G176800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41396035-41397034 Glycine max
Glyma.20G176800 1.0kb downstream 1.0kb downstream 2962 true Chr20: 41393073-41396034 Glycine max
Glyma.20G176800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41393073-41394072 Glycine max
Glyma.20G176800 2.0kb upstream 2.0kb upstream 3962 true Chr20: 41394073-41398034 Glycine max
Glyma.20G176800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41396035-41398034 Glycine max
Glyma.20G176800 2.0kb downstream 2.0kb downstream 3962 true Chr20: 41392073-41396034 Glycine max
Glyma.20G176800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41392073-41394072 Glycine max
Glyma.20G176800 5.0kb upstream 5.0kb upstream 6962 true Chr20: 41394073-41401034 Glycine max
Glyma.20G176800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41396035-41401034 Glycine max
Glyma.20G176800 5.0kb downstream 5.0kb downstream 6962 true Chr20: 41389073-41396034 Glycine max
Glyma.20G176800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41389073-41394072 Glycine max
Glyma.20G176800 10.0kb upstream 10.0kb upstream 11962 true Chr20: 41394073-41406034 Glycine max
Glyma.20G176800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41396035-41406034 Glycine max
Glyma.20G176800 10.0kb downstream 10.0kb downstream 11962 true Chr20: 41384073-41396034 Glycine max
Glyma.20G176800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41384073-41394072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303664 5265 Fabidae View MSA
124071598 5270 Rosid View MSA
123750317 5271 Pentapetalae View MSA
122794968 5272 Eudicot View MSA
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.44151 0.0 5.01507   High
cufflinks 0.0978784 0.0 0.389663 Low  
cufflinks 0.0468461 0.0 0.192922 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0819604 0.0 0.329026 Low  
cufflinks 0.0514817 0.0 0.211181 Low  
cufflinks 0.0559589 0.0 0.228057 Low  
cufflinks 0.0433985 0.0 0.179645 Low  
cufflinks 0.038     Low  
cufflinks 0.039     Low  
cufflinks 0.057     Low  
cufflinks 0.156        
cufflinks 0.081        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.063     Low  
cufflinks 0.125        
cufflinks 2.243       High
cufflinks 0.028     Low  
cufflinks 0.018     Low  
cufflinks 0.043     Low  
cufflinks 0.043     Low  
cufflinks 0.028     Low  
cufflinks 0.01     Low Low
cufflinks 0.037     Low  

0 Strain