Gene : Glyma.20G177700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3366 - Mitochondrial F1F0-ATP synthase, subunit d/ATP7 Genomic Order:  1777
Name:  ? Glyma.20G177700 Secondary Identifier:  ? PAC:30521657
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G177700 0.5kb upstream 0.5kb upstream 4268 true Chr20: 41517936-41522203 Glycine max
Glyma.20G177700 0.5kb upstream 0.5kb upstream 500 false Chr20: 41517936-41518435 Glycine max
Glyma.20G177700 0.5kb downstream 0.5kb downstream 4268 true Chr20: 41518436-41522703 Glycine max
Glyma.20G177700 0.5kb downstream 0.5kb downstream 500 false Chr20: 41522204-41522703 Glycine max
Glyma.20G177700 1.0kb upstream 1.0kb upstream 4768 true Chr20: 41517436-41522203 Glycine max
Glyma.20G177700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41517436-41518435 Glycine max
Glyma.20G177700 1.0kb downstream 1.0kb downstream 4768 true Chr20: 41518436-41523203 Glycine max
Glyma.20G177700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41522204-41523203 Glycine max
Glyma.20G177700 2.0kb upstream 2.0kb upstream 5768 true Chr20: 41516436-41522203 Glycine max
Glyma.20G177700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41516436-41518435 Glycine max
Glyma.20G177700 2.0kb downstream 2.0kb downstream 5768 true Chr20: 41518436-41524203 Glycine max
Glyma.20G177700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41522204-41524203 Glycine max
Glyma.20G177700 5.0kb upstream 5.0kb upstream 8768 true Chr20: 41513436-41522203 Glycine max
Glyma.20G177700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41513436-41518435 Glycine max
Glyma.20G177700 5.0kb downstream 5.0kb downstream 8768 true Chr20: 41518436-41527203 Glycine max
Glyma.20G177700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41522204-41527203 Glycine max
Glyma.20G177700 10.0kb upstream 10.0kb upstream 13768 true Chr20: 41508436-41522203 Glycine max
Glyma.20G177700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41508436-41518435 Glycine max
Glyma.20G177700 10.0kb downstream 10.0kb downstream 13768 true Chr20: 41518436-41532203 Glycine max
Glyma.20G177700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41522204-41532203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300441 5265 Fabidae View MSA
124061546 5270 Rosid View MSA
123743744 5271 Pentapetalae View MSA
122791088 5272 Eudicot View MSA
122044674 5273 Angiosperm View MSA
121348780 5274 Embryophyte View MSA
123427707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.7552 0.0 248.943 High Low
cufflinks 144.656 0.0 425.211 High  
cufflinks 119.79 0.0 344.443 High  
cufflinks 132.585 0.0 385.765 High  
cufflinks 180.789 0.0 550.542 High  
cufflinks 234.413 0.0 748.211 High High
cufflinks 117.731 0.0 335.481 High  
cufflinks 146.068 0.0 429.793 High  
cufflinks 179.817 0.0 546.019 High  
cufflinks 42.346     High High
cufflinks 18.383     High Low
cufflinks 31.666     High  
cufflinks 55.392     High High
cufflinks 64.357     High High
cufflinks 17.333     High Low
cufflinks 25.878     High  
cufflinks 21.41     High  
cufflinks 43.357     High High
cufflinks 32.567     High  
cufflinks 22.113     High  
cufflinks 24.529     High  
cufflinks 24.391     High  
cufflinks 27.898     High  
cufflinks 19.523     High Low
cufflinks 26.033     High  
cufflinks 31.746     High  

0 Strain