Gene : Glyma.20G177800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24089:SF300 - MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN C Genomic Order:  1778
Name:  ? Glyma.20G177800 Secondary Identifier:  ? PAC:30521919
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G177800 0.5kb upstream 0.5kb upstream 7987 true Chr20: 41524383-41532369 Glycine max
Glyma.20G177800 0.5kb upstream 0.5kb upstream 500 false Chr20: 41531870-41532369 Glycine max
Glyma.20G177800 0.5kb downstream 0.5kb downstream 7987 true Chr20: 41523883-41531869 Glycine max
Glyma.20G177800 0.5kb downstream 0.5kb downstream 500 false Chr20: 41523883-41524382 Glycine max
Glyma.20G177800 1.0kb upstream 1.0kb upstream 8487 true Chr20: 41524383-41532869 Glycine max
Glyma.20G177800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41531870-41532869 Glycine max
Glyma.20G177800 1.0kb downstream 1.0kb downstream 8487 true Chr20: 41523383-41531869 Glycine max
Glyma.20G177800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41523383-41524382 Glycine max
Glyma.20G177800 2.0kb upstream 2.0kb upstream 9487 true Chr20: 41524383-41533869 Glycine max
Glyma.20G177800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41531870-41533869 Glycine max
Glyma.20G177800 2.0kb downstream 2.0kb downstream 9487 true Chr20: 41522383-41531869 Glycine max
Glyma.20G177800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41522383-41524382 Glycine max
Glyma.20G177800 5.0kb upstream 5.0kb upstream 12487 true Chr20: 41524383-41536869 Glycine max
Glyma.20G177800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41531870-41536869 Glycine max
Glyma.20G177800 5.0kb downstream 5.0kb downstream 12487 true Chr20: 41519383-41531869 Glycine max
Glyma.20G177800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41519383-41524382 Glycine max
Glyma.20G177800 10.0kb upstream 10.0kb upstream 17487 true Chr20: 41524383-41541869 Glycine max
Glyma.20G177800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41531870-41541869 Glycine max
Glyma.20G177800 10.0kb downstream 10.0kb downstream 17487 true Chr20: 41514383-41531869 Glycine max
Glyma.20G177800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41514383-41524382 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304474 5265 Fabidae View MSA
124063938 5270 Rosid View MSA
123743725 5271 Pentapetalae View MSA
122792534 5272 Eudicot View MSA
122046153 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121348054 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1038 0.0 34.9224   High
cufflinks 3.73878 0.0 14.2848   Low
cufflinks 6.70577 0.0 23.316    
cufflinks 5.16107 0.0 18.6309    
cufflinks 5.48747 0.0 19.8101    
cufflinks 8.16968 0.0 28.3   High
cufflinks 4.26751 0.0 15.9142    
cufflinks 3.78856 0.0 14.362   Low
cufflinks 4.71089 0.0 17.3847    
cufflinks 1.646        
cufflinks 4.466        
cufflinks 1.662        
cufflinks 1.901        
cufflinks 1.952        
cufflinks 8.432     High High
cufflinks 5.28       High
cufflinks 1.036       Low
cufflinks 1.464       Low
cufflinks 1.664        
cufflinks 5.152        
cufflinks 3.667        
cufflinks 4.207        
cufflinks 2.498        
cufflinks 3.975        
cufflinks 6.425       High
cufflinks 2.347        

0 Strain