Gene : Glyma.20G169500 G. max Wm82.a2.v1
Genomic Order:  1695 Name:  ? Glyma.20G169500
Secondary Identifier:  ? PAC:30522608
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G169500 0.5kb upstream 0.5kb upstream 3975 true Chr20: 40722786-40726760 Glycine max
Glyma.20G169500 0.5kb upstream 0.5kb upstream 500 false Chr20: 40726261-40726760 Glycine max
Glyma.20G169500 0.5kb downstream 0.5kb downstream 3975 true Chr20: 40722286-40726260 Glycine max
Glyma.20G169500 0.5kb downstream 0.5kb downstream 500 false Chr20: 40722286-40722785 Glycine max
Glyma.20G169500 1.0kb upstream 1.0kb upstream 4475 true Chr20: 40722786-40727260 Glycine max
Glyma.20G169500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40726261-40727260 Glycine max
Glyma.20G169500 1.0kb downstream 1.0kb downstream 4475 true Chr20: 40721786-40726260 Glycine max
Glyma.20G169500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40721786-40722785 Glycine max
Glyma.20G169500 2.0kb upstream 2.0kb upstream 5475 true Chr20: 40722786-40728260 Glycine max
Glyma.20G169500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40726261-40728260 Glycine max
Glyma.20G169500 2.0kb downstream 2.0kb downstream 5475 true Chr20: 40720786-40726260 Glycine max
Glyma.20G169500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40720786-40722785 Glycine max
Glyma.20G169500 5.0kb upstream 5.0kb upstream 8475 true Chr20: 40722786-40731260 Glycine max
Glyma.20G169500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40726261-40731260 Glycine max
Glyma.20G169500 5.0kb downstream 5.0kb downstream 8475 true Chr20: 40717786-40726260 Glycine max
Glyma.20G169500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40717786-40722785 Glycine max
Glyma.20G169500 10.0kb upstream 10.0kb upstream 13475 true Chr20: 40722786-40736260 Glycine max
Glyma.20G169500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40726261-40736260 Glycine max
Glyma.20G169500 10.0kb downstream 10.0kb downstream 13475 true Chr20: 40712786-40726260 Glycine max
Glyma.20G169500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40712786-40722785 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310555 5265 Fabidae View MSA
124063800 5270 Rosid View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.2702 0.0 115.508 High High
cufflinks 6.69083 0.0 20.6499    
cufflinks 2.4991 0.0 8.69618    
cufflinks 4.0442 0.0 13.3408    
cufflinks 0.441496 0.0 1.69825   Low
cufflinks 0.295722 0.0 1.15744   Low
cufflinks 3.37605 0.0 11.4427    
cufflinks 3.52061 0.0 11.8045    
cufflinks 0.437705 0.0 1.68359   Low
cufflinks 1.257        
cufflinks 0.027     Low  
cufflinks 0.965        
cufflinks 0.068     Low  
cufflinks 0.112        
cufflinks 0.005     Low Low
cufflinks 3.93       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.984        
cufflinks 1.271        
cufflinks 3.046        
cufflinks 0.005     Low Low
cufflinks 4.203       High
cufflinks 4.651       High
cufflinks 0.017     Low Low
cufflinks 4.406       High
cufflinks 0.012     Low Low

0 Strain