Gene : Glyma.20G169900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  1699
Name:  ? Glyma.20G169900 Secondary Identifier:  ? PAC:30521317
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G169900 0.5kb upstream 0.5kb upstream 2496 true Chr20: 40748299-40750794 Glycine max
Glyma.20G169900 0.5kb upstream 0.5kb upstream 500 false Chr20: 40750295-40750794 Glycine max
Glyma.20G169900 0.5kb downstream 0.5kb downstream 2496 true Chr20: 40747799-40750294 Glycine max
Glyma.20G169900 0.5kb downstream 0.5kb downstream 500 false Chr20: 40747799-40748298 Glycine max
Glyma.20G169900 1.0kb upstream 1.0kb upstream 2996 true Chr20: 40748299-40751294 Glycine max
Glyma.20G169900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40750295-40751294 Glycine max
Glyma.20G169900 1.0kb downstream 1.0kb downstream 2996 true Chr20: 40747299-40750294 Glycine max
Glyma.20G169900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40747299-40748298 Glycine max
Glyma.20G169900 2.0kb upstream 2.0kb upstream 3996 true Chr20: 40748299-40752294 Glycine max
Glyma.20G169900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40750295-40752294 Glycine max
Glyma.20G169900 2.0kb downstream 2.0kb downstream 3996 true Chr20: 40746299-40750294 Glycine max
Glyma.20G169900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40746299-40748298 Glycine max
Glyma.20G169900 5.0kb upstream 5.0kb upstream 6996 true Chr20: 40748299-40755294 Glycine max
Glyma.20G169900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40750295-40755294 Glycine max
Glyma.20G169900 5.0kb downstream 5.0kb downstream 6996 true Chr20: 40743299-40750294 Glycine max
Glyma.20G169900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40743299-40748298 Glycine max
Glyma.20G169900 10.0kb upstream 10.0kb upstream 11996 true Chr20: 40748299-40760294 Glycine max
Glyma.20G169900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40750295-40760294 Glycine max
Glyma.20G169900 10.0kb downstream 10.0kb downstream 11996 true Chr20: 40738299-40750294 Glycine max
Glyma.20G169900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40738299-40748298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312708 5265 Fabidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 208.38 0.0 668.732 High  
cufflinks 236.078 0.0 776.305 High  
cufflinks 102.476 0.0 293.242 High Low
cufflinks 172.953 0.0 536.73 High  
cufflinks 341.4 0.0 1232.42 High  
cufflinks 261.531 0.0 878.005 High  
cufflinks 1221.86 0.0 6872.58 High High
cufflinks 209.402 0.0 674.835 High  
cufflinks 243.936 0.0 809.678 High  
cufflinks 77.514     High  
cufflinks 33.704     High Low
cufflinks 60.343     High  
cufflinks 138.526     High High
cufflinks 207.242     High High
cufflinks 39.43     High Low
cufflinks 82.148     High  
cufflinks 59.456     High  
cufflinks 63.848     High  
cufflinks 92.715     High  
cufflinks 62.835     High  
cufflinks 49.01     High  
cufflinks 64.978     High  
cufflinks 85.392     High  
cufflinks 36.459     High Low
cufflinks 76.547     High  
cufflinks 58.774     High  

0 Strain