Gene : Glyma.20G170200 G. max Wm82.a2.v1
Defline:  (1 of 2) 3.4.17.22 - Metallocarboxypeptidase D / Carboxypeptidase D Genomic Order:  1702
Name:  ? Glyma.20G170200 Secondary Identifier:  ? PAC:30521379
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G170200 0.5kb upstream 0.5kb upstream 11353 true Chr20: 40787655-40799007 Glycine max
Glyma.20G170200 0.5kb upstream 0.5kb upstream 500 false Chr20: 40787655-40788154 Glycine max
Glyma.20G170200 0.5kb downstream 0.5kb downstream 11353 true Chr20: 40788155-40799507 Glycine max
Glyma.20G170200 0.5kb downstream 0.5kb downstream 500 false Chr20: 40799008-40799507 Glycine max
Glyma.20G170200 1.0kb upstream 1.0kb upstream 11853 true Chr20: 40787155-40799007 Glycine max
Glyma.20G170200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40787155-40788154 Glycine max
Glyma.20G170200 1.0kb downstream 1.0kb downstream 11853 true Chr20: 40788155-40800007 Glycine max
Glyma.20G170200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40799008-40800007 Glycine max
Glyma.20G170200 2.0kb upstream 2.0kb upstream 12853 true Chr20: 40786155-40799007 Glycine max
Glyma.20G170200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40786155-40788154 Glycine max
Glyma.20G170200 2.0kb downstream 2.0kb downstream 12853 true Chr20: 40788155-40801007 Glycine max
Glyma.20G170200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40799008-40801007 Glycine max
Glyma.20G170200 5.0kb upstream 5.0kb upstream 15853 true Chr20: 40783155-40799007 Glycine max
Glyma.20G170200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40783155-40788154 Glycine max
Glyma.20G170200 5.0kb downstream 5.0kb downstream 15853 true Chr20: 40788155-40804007 Glycine max
Glyma.20G170200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40799008-40804007 Glycine max
Glyma.20G170200 10.0kb upstream 10.0kb upstream 20853 true Chr20: 40778155-40799007 Glycine max
Glyma.20G170200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40778155-40788154 Glycine max
Glyma.20G170200 10.0kb downstream 10.0kb downstream 20853 true Chr20: 40788155-40809007 Glycine max
Glyma.20G170200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40799008-40809007 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026287 5273 Angiosperm View MSA
122307423 5265 Fabidae View MSA
124063541 5270 Rosid View MSA
123739796 5271 Pentapetalae View MSA
122793886 5272 Eudicot View MSA
121351102 5274 Embryophyte View MSA
123424980 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.77925 0.0 21.4632    
cufflinks 5.07725 0.0 14.6384    
cufflinks 8.34911 0.0 22.8393    
cufflinks 7.0288 0.0 19.5363    
cufflinks 4.40288 0.0 12.9506    
cufflinks 4.83675 0.0 14.0052    
cufflinks 13.8677 0.0 37.1198   High
cufflinks 4.13755 0.0 12.2407    
cufflinks 4.40218 0.0 12.9246    
cufflinks 0.589       Low
cufflinks 1.272        
cufflinks 1.285        
cufflinks 0.708        
cufflinks 0.793        
cufflinks 1.088        
cufflinks 2.107        
cufflinks 0.476       Low
cufflinks 1.569        
cufflinks 0.883        
cufflinks 2.817       High
cufflinks 1.041        
cufflinks 2.375       High
cufflinks 2.152       High
cufflinks 1.322        
cufflinks 2.686       High
cufflinks 0.712        

0 Strain