Gene : Glyma.20G172800 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1728
Name:  ? Glyma.20G172800 Secondary Identifier:  ? PAC:30519820
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G172800 0.5kb upstream 0.5kb upstream 1244 true Chr20: 41033979-41035222 Glycine max
Glyma.20G172800 0.5kb upstream 0.5kb upstream 500 false Chr20: 41033979-41034478 Glycine max
Glyma.20G172800 0.5kb downstream 0.5kb downstream 1244 true Chr20: 41034479-41035722 Glycine max
Glyma.20G172800 0.5kb downstream 0.5kb downstream 500 false Chr20: 41035223-41035722 Glycine max
Glyma.20G172800 1.0kb upstream 1.0kb upstream 1744 true Chr20: 41033479-41035222 Glycine max
Glyma.20G172800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41033479-41034478 Glycine max
Glyma.20G172800 1.0kb downstream 1.0kb downstream 1744 true Chr20: 41034479-41036222 Glycine max
Glyma.20G172800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41035223-41036222 Glycine max
Glyma.20G172800 2.0kb upstream 2.0kb upstream 2744 true Chr20: 41032479-41035222 Glycine max
Glyma.20G172800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41032479-41034478 Glycine max
Glyma.20G172800 2.0kb downstream 2.0kb downstream 2744 true Chr20: 41034479-41037222 Glycine max
Glyma.20G172800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41035223-41037222 Glycine max
Glyma.20G172800 5.0kb upstream 5.0kb upstream 5744 true Chr20: 41029479-41035222 Glycine max
Glyma.20G172800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41029479-41034478 Glycine max
Glyma.20G172800 5.0kb downstream 5.0kb downstream 5744 true Chr20: 41034479-41040222 Glycine max
Glyma.20G172800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41035223-41040222 Glycine max
Glyma.20G172800 10.0kb upstream 10.0kb upstream 10744 true Chr20: 41024479-41035222 Glycine max
Glyma.20G172800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41024479-41034478 Glycine max
Glyma.20G172800 10.0kb downstream 10.0kb downstream 10744 true Chr20: 41034479-41045222 Glycine max
Glyma.20G172800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41035223-41045222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298508 5265 Fabidae View MSA
124037540 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0596851 0.0 0.25853 Low  
cufflinks 1.27649 0.0 4.75128   High
cufflinks 0.532668 0.0 2.06302    
cufflinks 0.0344733 0.0 0.15681 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.599436 0.0 2.30639    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.357       High
cufflinks 0.385       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.064     Low  
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  

0 Strain