Gene : Glyma.20G203700 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR31190:SF15 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B Genomic Order:  2037
Name:  ? Glyma.20G203700 Secondary Identifier:  ? PAC:30521136

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G203700 0.5kb upstream 0.5kb upstream 1672 true Chr20: 44059908-44061579 Glycine max
Glyma.20G203700 0.5kb upstream 0.5kb upstream 500 false Chr20: 44059908-44060407 Glycine max
Glyma.20G203700 0.5kb downstream 0.5kb downstream 1672 true Chr20: 44060408-44062079 Glycine max
Glyma.20G203700 0.5kb downstream 0.5kb downstream 500 false Chr20: 44061580-44062079 Glycine max
Glyma.20G203700 1.0kb upstream 1.0kb upstream 2172 true Chr20: 44059408-44061579 Glycine max
Glyma.20G203700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44059408-44060407 Glycine max
Glyma.20G203700 1.0kb downstream 1.0kb downstream 2172 true Chr20: 44060408-44062579 Glycine max
Glyma.20G203700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44061580-44062579 Glycine max
Glyma.20G203700 2.0kb upstream 2.0kb upstream 3172 true Chr20: 44058408-44061579 Glycine max
Glyma.20G203700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44058408-44060407 Glycine max
Glyma.20G203700 2.0kb downstream 2.0kb downstream 3172 true Chr20: 44060408-44063579 Glycine max
Glyma.20G203700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44061580-44063579 Glycine max
Glyma.20G203700 5.0kb upstream 5.0kb upstream 6172 true Chr20: 44055408-44061579 Glycine max
Glyma.20G203700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44055408-44060407 Glycine max
Glyma.20G203700 5.0kb downstream 5.0kb downstream 6172 true Chr20: 44060408-44066579 Glycine max
Glyma.20G203700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44061580-44066579 Glycine max
Glyma.20G203700 10.0kb upstream 10.0kb upstream 11172 true Chr20: 44050408-44061579 Glycine max
Glyma.20G203700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44050408-44060407 Glycine max
Glyma.20G203700 10.0kb downstream 10.0kb downstream 11172 true Chr20: 44060408-44071579 Glycine max
Glyma.20G203700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44061580-44071579 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315295 5265 Fabidae View MSA
124074692 5270 Rosid View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.73486 0.0 20.0091   High
cufflinks 0.501158 0.0 1.89773   Low
cufflinks 2.79935 0.0 9.4595    
cufflinks 0.313113 0.0 1.21021   Low
cufflinks 2.43756 0.0 8.28516    
cufflinks 2.79771 0.0 9.38216    
cufflinks 3.56957 0.0 11.5832    
cufflinks 0.725966 0.0 2.70061    
cufflinks 3.35461 0.0 10.9943    
cufflinks 1.925        
cufflinks 4.836       High
cufflinks 2.339        
cufflinks 1.618        
cufflinks 0.212       Low
cufflinks 5.078       High
cufflinks 0.603        
cufflinks 2.231        
cufflinks 0.18       Low
cufflinks 1.546        
cufflinks 1.165        
cufflinks 2.557        
cufflinks 1.357        
cufflinks 2.695        
cufflinks 3.349        
cufflinks 0.756        
cufflinks 2.499        

0 Strain