Gene : Glyma.20G205600 G. max Wm82.a2.v1
Defline:  (1 of 2) PF06632 - DNA double-strand break repair and V(D)J recombination protein XRCC4 (XRCC4) Genomic Order:  2056
Name:  ? Glyma.20G205600 Secondary Identifier:  ? PAC:30521199
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G205600 0.5kb upstream 0.5kb upstream 4747 true Chr20: 44250328-44255074 Glycine max
Glyma.20G205600 0.5kb upstream 0.5kb upstream 500 false Chr20: 44250328-44250827 Glycine max
Glyma.20G205600 0.5kb downstream 0.5kb downstream 4747 true Chr20: 44250828-44255574 Glycine max
Glyma.20G205600 0.5kb downstream 0.5kb downstream 500 false Chr20: 44255075-44255574 Glycine max
Glyma.20G205600 1.0kb upstream 1.0kb upstream 5247 true Chr20: 44249828-44255074 Glycine max
Glyma.20G205600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44249828-44250827 Glycine max
Glyma.20G205600 1.0kb downstream 1.0kb downstream 5247 true Chr20: 44250828-44256074 Glycine max
Glyma.20G205600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44255075-44256074 Glycine max
Glyma.20G205600 2.0kb upstream 2.0kb upstream 6247 true Chr20: 44248828-44255074 Glycine max
Glyma.20G205600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44248828-44250827 Glycine max
Glyma.20G205600 2.0kb downstream 2.0kb downstream 6247 true Chr20: 44250828-44257074 Glycine max
Glyma.20G205600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44255075-44257074 Glycine max
Glyma.20G205600 5.0kb upstream 5.0kb upstream 9247 true Chr20: 44245828-44255074 Glycine max
Glyma.20G205600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44245828-44250827 Glycine max
Glyma.20G205600 5.0kb downstream 5.0kb downstream 9247 true Chr20: 44250828-44260074 Glycine max
Glyma.20G205600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44255075-44260074 Glycine max
Glyma.20G205600 10.0kb upstream 10.0kb upstream 14247 true Chr20: 44240828-44255074 Glycine max
Glyma.20G205600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44240828-44250827 Glycine max
Glyma.20G205600 10.0kb downstream 10.0kb downstream 14247 true Chr20: 44250828-44265074 Glycine max
Glyma.20G205600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44255075-44265074 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300913 5265 Fabidae View MSA
124065515 5270 Rosid View MSA
123736915 5271 Pentapetalae View MSA
122786405 5272 Eudicot View MSA
122042130 5273 Angiosperm View MSA
121344133 5274 Embryophyte View MSA
123379982 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.773488 0.0 2.86103    
cufflinks 1.10062 0.0 3.98718    
cufflinks 1.64953 0.0 5.79993   High
cufflinks 0.766273 0.0 2.83338    
cufflinks 0.460086 0.0 1.74389    
cufflinks 3.01995 0.0 9.98238   High
cufflinks 0.467179 0.0 1.77083    
cufflinks 0.375211 0.0 1.4329   Low
cufflinks 0.790459 0.0 2.91907    
cufflinks 0.096     Low Low
cufflinks 1.9       High
cufflinks 0.764        
cufflinks 0.408        
cufflinks 0.405        
cufflinks 0.392        
cufflinks 0.44        
cufflinks 0.163       Low
cufflinks 0.572        
cufflinks 0.747        
cufflinks 0.256        
cufflinks 2.076       High
cufflinks 0.331        
cufflinks 0.302        
cufflinks 1.974       High
cufflinks 0.257        
cufflinks 0.35        

0 Strain