Gene : Glyma.20G207700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  2077
Name:  ? Glyma.20G207700 Secondary Identifier:  ? PAC:30523126
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G207700 0.5kb upstream 0.5kb upstream 14985 true Chr20: 44437584-44452568 Glycine max
Glyma.20G207700 0.5kb upstream 0.5kb upstream 500 false Chr20: 44452069-44452568 Glycine max
Glyma.20G207700 0.5kb downstream 0.5kb downstream 14985 true Chr20: 44437084-44452068 Glycine max
Glyma.20G207700 0.5kb downstream 0.5kb downstream 500 false Chr20: 44437084-44437583 Glycine max
Glyma.20G207700 1.0kb upstream 1.0kb upstream 15485 true Chr20: 44437584-44453068 Glycine max
Glyma.20G207700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44452069-44453068 Glycine max
Glyma.20G207700 1.0kb downstream 1.0kb downstream 15485 true Chr20: 44436584-44452068 Glycine max
Glyma.20G207700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44436584-44437583 Glycine max
Glyma.20G207700 2.0kb upstream 2.0kb upstream 16485 true Chr20: 44437584-44454068 Glycine max
Glyma.20G207700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44452069-44454068 Glycine max
Glyma.20G207700 2.0kb downstream 2.0kb downstream 16485 true Chr20: 44435584-44452068 Glycine max
Glyma.20G207700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44435584-44437583 Glycine max
Glyma.20G207700 5.0kb upstream 5.0kb upstream 19485 true Chr20: 44437584-44457068 Glycine max
Glyma.20G207700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44452069-44457068 Glycine max
Glyma.20G207700 5.0kb downstream 5.0kb downstream 19485 true Chr20: 44432584-44452068 Glycine max
Glyma.20G207700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44432584-44437583 Glycine max
Glyma.20G207700 10.0kb upstream 10.0kb upstream 24485 true Chr20: 44437584-44462068 Glycine max
Glyma.20G207700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44452069-44462068 Glycine max
Glyma.20G207700 10.0kb downstream 10.0kb downstream 24485 true Chr20: 44427584-44452068 Glycine max
Glyma.20G207700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44427584-44437583 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299978 5265 Fabidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31059 0.0 24.7193    
cufflinks 3.20792 0.0 22.4897    
cufflinks 2.57988 0.0 18.8972    
cufflinks 3.39266 0.0 20.2615   High
cufflinks 1.99806 0.0 9.55955   Low
cufflinks 2.80397 0.0 16.4465    
cufflinks 2.40869 0.0 14.0802    
cufflinks 1.95275 0.0 11.6643   Low
cufflinks 3.04991 0.0 13.4989    
cufflinks 0.167       Low
cufflinks 0.13       Low
cufflinks 0.465        
cufflinks 0.391        
cufflinks 0.29        
cufflinks 0.198        
cufflinks 0.515        
cufflinks 0.219        
cufflinks 0.459        
cufflinks 0.605       High
cufflinks 0.624       High
cufflinks 0.183        
cufflinks 0.549       High
cufflinks 0.36        
cufflinks 0.136       Low
cufflinks 0.554       High
cufflinks 0.231        

0 Strain