Gene : Glyma.20G208800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11909:SF178 - CASEIN KINASE 1-LIKE PROTEIN 8 Genomic Order:  2088
Name:  ? Glyma.20G208800 Secondary Identifier:  ? PAC:30520695
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G208800 0.5kb upstream 0.5kb upstream 6953 true Chr20: 44506915-44513867 Glycine max
Glyma.20G208800 0.5kb upstream 0.5kb upstream 500 false Chr20: 44513368-44513867 Glycine max
Glyma.20G208800 0.5kb downstream 0.5kb downstream 6953 true Chr20: 44506415-44513367 Glycine max
Glyma.20G208800 0.5kb downstream 0.5kb downstream 500 false Chr20: 44506415-44506914 Glycine max
Glyma.20G208800 1.0kb upstream 1.0kb upstream 7453 true Chr20: 44506915-44514367 Glycine max
Glyma.20G208800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44513368-44514367 Glycine max
Glyma.20G208800 1.0kb downstream 1.0kb downstream 7453 true Chr20: 44505915-44513367 Glycine max
Glyma.20G208800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44505915-44506914 Glycine max
Glyma.20G208800 2.0kb upstream 2.0kb upstream 8453 true Chr20: 44506915-44515367 Glycine max
Glyma.20G208800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44513368-44515367 Glycine max
Glyma.20G208800 2.0kb downstream 2.0kb downstream 8453 true Chr20: 44504915-44513367 Glycine max
Glyma.20G208800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44504915-44506914 Glycine max
Glyma.20G208800 5.0kb upstream 5.0kb upstream 11453 true Chr20: 44506915-44518367 Glycine max
Glyma.20G208800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44513368-44518367 Glycine max
Glyma.20G208800 5.0kb downstream 5.0kb downstream 11453 true Chr20: 44501915-44513367 Glycine max
Glyma.20G208800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44501915-44506914 Glycine max
Glyma.20G208800 10.0kb upstream 10.0kb upstream 16453 true Chr20: 44506915-44523367 Glycine max
Glyma.20G208800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44513368-44523367 Glycine max
Glyma.20G208800 10.0kb downstream 10.0kb downstream 16453 true Chr20: 44496915-44513367 Glycine max
Glyma.20G208800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44496915-44506914 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311571 5265 Fabidae View MSA
124074608 5270 Rosid View MSA
123745824 5271 Pentapetalae View MSA
122787812 5272 Eudicot View MSA
122045812 5273 Angiosperm View MSA
121310507 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5526 0.0 52.6286    
cufflinks 16.0683 0.0 42.9817   Low
cufflinks 20.361 0.0 55.0241 High  
cufflinks 20.187 0.0 54.4641 High  
cufflinks 17.8679 0.0 47.9109    
cufflinks 17.9035 0.0 48.0518    
cufflinks 21.4569 0.0 57.9342    
cufflinks 24.4993 0.0 66.8515 High High
cufflinks 15.5379 0.0 41.5296   Low
cufflinks 9.239     High  
cufflinks 3.61       Low
cufflinks 9.777     High  
cufflinks 9.438     High  
cufflinks 10.534     High  
cufflinks 2.358       Low
cufflinks 8.076     High  
cufflinks 3.939       Low
cufflinks 11.42     High High
cufflinks 8.594     High  
cufflinks 8.554     High  
cufflinks 4.94        
cufflinks 9.416     High  
cufflinks 7.089        
cufflinks 5.747        
cufflinks 8.613     High  
cufflinks 5.199        

0 Strain