Gene : Glyma.20G198400 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2108 - 3'-5' DNA helicase Genomic Order:  1984
Name:  ? Glyma.20G198400 Secondary Identifier:  ? PAC:30522190
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G198400 0.5kb upstream 0.5kb upstream 32043 true Chr20: 43601202-43633244 Glycine max
Glyma.20G198400 0.5kb upstream 0.5kb upstream 500 false Chr20: 43601202-43601701 Glycine max
Glyma.20G198400 0.5kb downstream 0.5kb downstream 32043 true Chr20: 43601702-43633744 Glycine max
Glyma.20G198400 0.5kb downstream 0.5kb downstream 500 false Chr20: 43633245-43633744 Glycine max
Glyma.20G198400 1.0kb upstream 1.0kb upstream 32543 true Chr20: 43600702-43633244 Glycine max
Glyma.20G198400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43600702-43601701 Glycine max
Glyma.20G198400 1.0kb downstream 1.0kb downstream 32543 true Chr20: 43601702-43634244 Glycine max
Glyma.20G198400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43633245-43634244 Glycine max
Glyma.20G198400 2.0kb upstream 2.0kb upstream 33543 true Chr20: 43599702-43633244 Glycine max
Glyma.20G198400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43599702-43601701 Glycine max
Glyma.20G198400 2.0kb downstream 2.0kb downstream 33543 true Chr20: 43601702-43635244 Glycine max
Glyma.20G198400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43633245-43635244 Glycine max
Glyma.20G198400 5.0kb upstream 5.0kb upstream 36543 true Chr20: 43596702-43633244 Glycine max
Glyma.20G198400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43596702-43601701 Glycine max
Glyma.20G198400 5.0kb downstream 5.0kb downstream 36543 true Chr20: 43601702-43638244 Glycine max
Glyma.20G198400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43633245-43638244 Glycine max
Glyma.20G198400 10.0kb upstream 10.0kb upstream 41543 true Chr20: 43591702-43633244 Glycine max
Glyma.20G198400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43591702-43601701 Glycine max
Glyma.20G198400 10.0kb downstream 10.0kb downstream 41543 true Chr20: 43601702-43643244 Glycine max
Glyma.20G198400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43633245-43643244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238022 5265 Fabidae Singleton cluster - no MSA
123983503 5270 Rosid Singleton cluster - no MSA
123559110 5271 Pentapetalae Singleton cluster - no MSA
122593917 5272 Eudicot Singleton cluster - no MSA
122049432 5273 Angiosperm View MSA
121348926 5274 Embryophyte View MSA
123427245 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.52951 0.0 7.77221   Low
cufflinks 3.97706 0.0 13.0373   High
cufflinks 3.34465 0.0 10.4068    
cufflinks 2.84585 0.0 9.48936    
cufflinks 3.63256 0.0 11.6453    
cufflinks 3.09486 0.0 9.51644    
cufflinks 3.29595 0.0 12.1498    
cufflinks 2.51785 0.0 8.33225   Low
cufflinks 4.1334 0.0 12.294   High
cufflinks 0.469       Low
cufflinks 0.852        
cufflinks 1.004       High
cufflinks 0.847        
cufflinks 0.997       High
cufflinks 0.778        
cufflinks 0.826        
cufflinks 0.512       Low
cufflinks 0.935        
cufflinks 1.002       High
cufflinks 0.796        
cufflinks 0.821        
cufflinks 0.851        
cufflinks 0.862        
cufflinks 0.873        
cufflinks 0.802        
cufflinks 0.633       Low

0 Strain