Gene : Glyma.20G199900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10693:SF20 - AT27578P Genomic Order:  1999
Name:  ? Glyma.20G199900 Secondary Identifier:  ? PAC:30521684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G199900 0.5kb upstream 0.5kb upstream 5463 true Chr20: 43742434-43747896 Glycine max
Glyma.20G199900 0.5kb upstream 0.5kb upstream 500 false Chr20: 43747397-43747896 Glycine max
Glyma.20G199900 0.5kb downstream 0.5kb downstream 5463 true Chr20: 43741934-43747396 Glycine max
Glyma.20G199900 0.5kb downstream 0.5kb downstream 500 false Chr20: 43741934-43742433 Glycine max
Glyma.20G199900 1.0kb upstream 1.0kb upstream 5963 true Chr20: 43742434-43748396 Glycine max
Glyma.20G199900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43747397-43748396 Glycine max
Glyma.20G199900 1.0kb downstream 1.0kb downstream 5963 true Chr20: 43741434-43747396 Glycine max
Glyma.20G199900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43741434-43742433 Glycine max
Glyma.20G199900 2.0kb upstream 2.0kb upstream 6963 true Chr20: 43742434-43749396 Glycine max
Glyma.20G199900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43747397-43749396 Glycine max
Glyma.20G199900 2.0kb downstream 2.0kb downstream 6963 true Chr20: 43740434-43747396 Glycine max
Glyma.20G199900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43740434-43742433 Glycine max
Glyma.20G199900 5.0kb upstream 5.0kb upstream 9963 true Chr20: 43742434-43752396 Glycine max
Glyma.20G199900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43747397-43752396 Glycine max
Glyma.20G199900 5.0kb downstream 5.0kb downstream 9963 true Chr20: 43737434-43747396 Glycine max
Glyma.20G199900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43737434-43742433 Glycine max
Glyma.20G199900 10.0kb upstream 10.0kb upstream 14963 true Chr20: 43742434-43757396 Glycine max
Glyma.20G199900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43747397-43757396 Glycine max
Glyma.20G199900 10.0kb downstream 10.0kb downstream 14963 true Chr20: 43732434-43747396 Glycine max
Glyma.20G199900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43732434-43742433 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255491 5265 Fabidae View MSA
124070794 5270 Rosid View MSA
123747329 5271 Pentapetalae View MSA
122793510 5272 Eudicot View MSA
122050704 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.43624 0.0 17.7278    
cufflinks 5.54629 0.0 23.4839    
cufflinks 3.83819 0.0 15.9372    
cufflinks 6.79625 0.0 27.5127   High
cufflinks 5.82288 0.0 21.9062    
cufflinks 2.24505 0.0 9.54405   Low
cufflinks 6.02558 0.0 25.0196    
cufflinks 5.01875 0.0 19.4502    
cufflinks 4.15928 0.0 17.0881    
cufflinks 0.716        
cufflinks 0.052     Low Low
cufflinks 1.008        
cufflinks 0.971        
cufflinks 1.458       High
cufflinks 0.131       Low
cufflinks 0.809        
cufflinks 0.332        
cufflinks 1.089        
cufflinks 1.321        
cufflinks 0.783        
cufflinks 0.095       Low
cufflinks 0.907        
cufflinks 1.227        
cufflinks 0.073       Low
cufflinks 0.892        
cufflinks 0.223        

0 Strain