Gene : Glyma.20G201500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31280:SF1 - F19P19.6 PROTEIN Genomic Order:  2015
Name:  ? Glyma.20G201500 Secondary Identifier:  ? PAC:30523383
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G201500 0.5kb upstream 0.5kb upstream 4846 true Chr20: 43852187-43857032 Glycine max
Glyma.20G201500 0.5kb upstream 0.5kb upstream 500 false Chr20: 43852187-43852686 Glycine max
Glyma.20G201500 0.5kb downstream 0.5kb downstream 4846 true Chr20: 43852687-43857532 Glycine max
Glyma.20G201500 0.5kb downstream 0.5kb downstream 500 false Chr20: 43857033-43857532 Glycine max
Glyma.20G201500 1.0kb upstream 1.0kb upstream 5346 true Chr20: 43851687-43857032 Glycine max
Glyma.20G201500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43851687-43852686 Glycine max
Glyma.20G201500 1.0kb downstream 1.0kb downstream 5346 true Chr20: 43852687-43858032 Glycine max
Glyma.20G201500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43857033-43858032 Glycine max
Glyma.20G201500 2.0kb upstream 2.0kb upstream 6346 true Chr20: 43850687-43857032 Glycine max
Glyma.20G201500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43850687-43852686 Glycine max
Glyma.20G201500 2.0kb downstream 2.0kb downstream 6346 true Chr20: 43852687-43859032 Glycine max
Glyma.20G201500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43857033-43859032 Glycine max
Glyma.20G201500 5.0kb upstream 5.0kb upstream 9346 true Chr20: 43847687-43857032 Glycine max
Glyma.20G201500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43847687-43852686 Glycine max
Glyma.20G201500 5.0kb downstream 5.0kb downstream 9346 true Chr20: 43852687-43862032 Glycine max
Glyma.20G201500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43857033-43862032 Glycine max
Glyma.20G201500 10.0kb upstream 10.0kb upstream 14346 true Chr20: 43842687-43857032 Glycine max
Glyma.20G201500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43842687-43852686 Glycine max
Glyma.20G201500 10.0kb downstream 10.0kb downstream 14346 true Chr20: 43852687-43867032 Glycine max
Glyma.20G201500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43857033-43867032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306146 5265 Fabidae View MSA
124064567 5270 Rosid View MSA
123739737 5271 Pentapetalae View MSA
122788845 5272 Eudicot View MSA
122044246 5273 Angiosperm View MSA
121310260 5274 Embryophyte View MSA
123347799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.010909 0.0 0.0464885 Low  
cufflinks 0.0323012 0.0 0.129459 Low  
cufflinks 12.0573 0.0 32.4486   High
cufflinks 0.236206 0.0 0.870305    
cufflinks 0.00459801 0.0 0.0211241 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.03713 0.0 8.49206   High
cufflinks 0.114827 0.0 0.437368 Low  
cufflinks 0.0120788 0.0 0.0510767 Low  
cufflinks 0.02     Low  
cufflinks 0.026     Low  
cufflinks 2.625       High
cufflinks 0.008     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 3.866       High
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  

0 Strain