Gene : Glyma.20G202300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  2023
Name:  ? Glyma.20G202300 Secondary Identifier:  ? PAC:30523432
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G202300 0.5kb upstream 0.5kb upstream 3067 true Chr20: 43941717-43944783 Glycine max
Glyma.20G202300 0.5kb upstream 0.5kb upstream 500 false Chr20: 43944284-43944783 Glycine max
Glyma.20G202300 0.5kb downstream 0.5kb downstream 3067 true Chr20: 43941217-43944283 Glycine max
Glyma.20G202300 0.5kb downstream 0.5kb downstream 500 false Chr20: 43941217-43941716 Glycine max
Glyma.20G202300 1.0kb upstream 1.0kb upstream 3567 true Chr20: 43941717-43945283 Glycine max
Glyma.20G202300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43944284-43945283 Glycine max
Glyma.20G202300 1.0kb downstream 1.0kb downstream 3567 true Chr20: 43940717-43944283 Glycine max
Glyma.20G202300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43940717-43941716 Glycine max
Glyma.20G202300 2.0kb upstream 2.0kb upstream 4567 true Chr20: 43941717-43946283 Glycine max
Glyma.20G202300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43944284-43946283 Glycine max
Glyma.20G202300 2.0kb downstream 2.0kb downstream 4567 true Chr20: 43939717-43944283 Glycine max
Glyma.20G202300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43939717-43941716 Glycine max
Glyma.20G202300 5.0kb upstream 5.0kb upstream 7567 true Chr20: 43941717-43949283 Glycine max
Glyma.20G202300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43944284-43949283 Glycine max
Glyma.20G202300 5.0kb downstream 5.0kb downstream 7567 true Chr20: 43936717-43944283 Glycine max
Glyma.20G202300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43936717-43941716 Glycine max
Glyma.20G202300 10.0kb upstream 10.0kb upstream 12567 true Chr20: 43941717-43954283 Glycine max
Glyma.20G202300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43944284-43954283 Glycine max
Glyma.20G202300 10.0kb downstream 10.0kb downstream 12567 true Chr20: 43931717-43944283 Glycine max
Glyma.20G202300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43931717-43941716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297655 5265 Fabidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.132813 0.0 0.530602 Low  
cufflinks 0.0667314 0.0 0.274813 Low Low
cufflinks 15.0716 0.0 41.0617    
cufflinks 22.2488 0.0 59.6231   High
cufflinks 0.327719 0.0 1.26171    
cufflinks 1.25552 0.0 4.52965    
cufflinks 21.4859 0.0 57.6503 High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.159        
cufflinks 0.223        
cufflinks 7.228     High  
cufflinks 4.178        
cufflinks 1.843        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.049        
cufflinks 0.074     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.604        
cufflinks 0.01     Low Low
cufflinks 0.006     Low Low
cufflinks 3.821        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.998        

0 Strain