Gene : Glyma.20G195500 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04578 - Protein of unknown function, DUF594 (DUF594) Genomic Order:  1955
Name:  ? Glyma.20G195500 Secondary Identifier:  ? PAC:30523211
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G195500 0.5kb upstream 0.5kb upstream 3545 true Chr20: 43383725-43387269 Glycine max
Glyma.20G195500 0.5kb upstream 0.5kb upstream 500 false Chr20: 43383725-43384224 Glycine max
Glyma.20G195500 0.5kb downstream 0.5kb downstream 3545 true Chr20: 43384225-43387769 Glycine max
Glyma.20G195500 0.5kb downstream 0.5kb downstream 500 false Chr20: 43387270-43387769 Glycine max
Glyma.20G195500 1.0kb upstream 1.0kb upstream 4045 true Chr20: 43383225-43387269 Glycine max
Glyma.20G195500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43383225-43384224 Glycine max
Glyma.20G195500 1.0kb downstream 1.0kb downstream 4045 true Chr20: 43384225-43388269 Glycine max
Glyma.20G195500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43387270-43388269 Glycine max
Glyma.20G195500 2.0kb upstream 2.0kb upstream 5045 true Chr20: 43382225-43387269 Glycine max
Glyma.20G195500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43382225-43384224 Glycine max
Glyma.20G195500 2.0kb downstream 2.0kb downstream 5045 true Chr20: 43384225-43389269 Glycine max
Glyma.20G195500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43387270-43389269 Glycine max
Glyma.20G195500 5.0kb upstream 5.0kb upstream 8045 true Chr20: 43379225-43387269 Glycine max
Glyma.20G195500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43379225-43384224 Glycine max
Glyma.20G195500 5.0kb downstream 5.0kb downstream 8045 true Chr20: 43384225-43392269 Glycine max
Glyma.20G195500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43387270-43392269 Glycine max
Glyma.20G195500 10.0kb upstream 10.0kb upstream 13045 true Chr20: 43374225-43387269 Glycine max
Glyma.20G195500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43374225-43384224 Glycine max
Glyma.20G195500 10.0kb downstream 10.0kb downstream 13045 true Chr20: 43384225-43397269 Glycine max
Glyma.20G195500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43387270-43397269 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122314211 5265 Fabidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0156524 0.0 0.0667024 Low  
cufflinks 0.0900042 0.0 0.351713 Low  
cufflinks 0.0610412 0.0 0.241562 Low  
cufflinks 0.00836663 0.0 0.0375431 Low Low
cufflinks 3.40052 0.0 9.78265   High
cufflinks 1.33771 0.0 4.36194    
cufflinks 0.0348101 0.0 0.141204 Low  
cufflinks 0.0993517 0.0 0.386707 Low  
cufflinks 4.47729 0.0 12.4679   High
cufflinks 0.145        
cufflinks 2.196        
cufflinks 0.098     Low Low
cufflinks 7.768     High High
cufflinks 7.987     High High
cufflinks 0.498        
cufflinks 0.243        
cufflinks 15.323     High High
cufflinks 0.084     Low Low
cufflinks 0.131        
cufflinks 0.106       Low
cufflinks 4.0        
cufflinks 0.224        
cufflinks 0.573        
cufflinks 3.479        
cufflinks 0.156        
cufflinks 5.937       High

0 Strain