Gene : Glyma.20G198000 G. max Wm82.a2.v1
Defline:  (1 of 4) 3.2.1.45 - Glucosylceramidase / D-glucosyl-N-acylsphingosine glucohydrolase Genomic Order:  1980
Name:  ? Glyma.20G198000 Secondary Identifier:  ? PAC:30521731
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G198000 0.5kb upstream 0.5kb upstream 12319 true Chr20: 43537344-43549662 Glycine max
Glyma.20G198000 0.5kb upstream 0.5kb upstream 500 false Chr20: 43537344-43537843 Glycine max
Glyma.20G198000 0.5kb downstream 0.5kb downstream 12319 true Chr20: 43537844-43550162 Glycine max
Glyma.20G198000 0.5kb downstream 0.5kb downstream 500 false Chr20: 43549663-43550162 Glycine max
Glyma.20G198000 1.0kb upstream 1.0kb upstream 12819 true Chr20: 43536844-43549662 Glycine max
Glyma.20G198000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43536844-43537843 Glycine max
Glyma.20G198000 1.0kb downstream 1.0kb downstream 12819 true Chr20: 43537844-43550662 Glycine max
Glyma.20G198000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43549663-43550662 Glycine max
Glyma.20G198000 2.0kb upstream 2.0kb upstream 13819 true Chr20: 43535844-43549662 Glycine max
Glyma.20G198000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43535844-43537843 Glycine max
Glyma.20G198000 2.0kb downstream 2.0kb downstream 13819 true Chr20: 43537844-43551662 Glycine max
Glyma.20G198000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43549663-43551662 Glycine max
Glyma.20G198000 5.0kb upstream 5.0kb upstream 16819 true Chr20: 43532844-43549662 Glycine max
Glyma.20G198000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43532844-43537843 Glycine max
Glyma.20G198000 5.0kb downstream 5.0kb downstream 16819 true Chr20: 43537844-43554662 Glycine max
Glyma.20G198000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43549663-43554662 Glycine max
Glyma.20G198000 10.0kb upstream 10.0kb upstream 21819 true Chr20: 43527844-43549662 Glycine max
Glyma.20G198000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43527844-43537843 Glycine max
Glyma.20G198000 10.0kb downstream 10.0kb downstream 21819 true Chr20: 43537844-43559662 Glycine max
Glyma.20G198000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43549663-43559662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307978 5265 Fabidae View MSA
124065180 5270 Rosid View MSA
123736605 5271 Pentapetalae View MSA
122785917 5272 Eudicot View MSA
122045045 5273 Angiosperm View MSA
121351037 5274 Embryophyte View MSA
123425340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5438 0.0 48.6054   High
cufflinks 5.88311 0.0 21.1127   Low
cufflinks 5.5797 0.0 20.0974   Low
cufflinks 10.7446 0.0 37.6489    
cufflinks 9.65875 0.0 33.5594    
cufflinks 11.5622 0.0 40.9209    
cufflinks 6.00266 0.0 21.0532   Low
cufflinks 11.5689 0.0 40.6284    
cufflinks 6.86157 0.0 20.602    
cufflinks 2.968        
cufflinks 4.202        
cufflinks 1.669        
cufflinks 2.259        
cufflinks 1.724        
cufflinks 3.067        
cufflinks 2.391        
cufflinks 22.86     High High
cufflinks 2.606        
cufflinks 1.643        
cufflinks 1.742        
cufflinks 6.651     High  
cufflinks 2.416        
cufflinks 1.489        
cufflinks 4.728        
cufflinks 1.915        
cufflinks 13.225     High High

0 Strain