Gene : Glyma.20G187400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR19241//PTHR19241:SF261 - ATP-BINDING CASSETTE TRANSPORTER Genomic Order:  1874
Name:  ? Glyma.20G187400 Secondary Identifier:  ? PAC:30521222
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G187400 0.5kb upstream 0.5kb upstream 13892 true Chr20: 42596282-42610173 Glycine max
Glyma.20G187400 0.5kb upstream 0.5kb upstream 500 false Chr20: 42596282-42596781 Glycine max
Glyma.20G187400 0.5kb downstream 0.5kb downstream 13892 true Chr20: 42596782-42610673 Glycine max
Glyma.20G187400 0.5kb downstream 0.5kb downstream 500 false Chr20: 42610174-42610673 Glycine max
Glyma.20G187400 1.0kb upstream 1.0kb upstream 14392 true Chr20: 42595782-42610173 Glycine max
Glyma.20G187400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42595782-42596781 Glycine max
Glyma.20G187400 1.0kb downstream 1.0kb downstream 14392 true Chr20: 42596782-42611173 Glycine max
Glyma.20G187400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42610174-42611173 Glycine max
Glyma.20G187400 2.0kb upstream 2.0kb upstream 15392 true Chr20: 42594782-42610173 Glycine max
Glyma.20G187400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42594782-42596781 Glycine max
Glyma.20G187400 2.0kb downstream 2.0kb downstream 15392 true Chr20: 42596782-42612173 Glycine max
Glyma.20G187400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42610174-42612173 Glycine max
Glyma.20G187400 5.0kb upstream 5.0kb upstream 18392 true Chr20: 42591782-42610173 Glycine max
Glyma.20G187400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42591782-42596781 Glycine max
Glyma.20G187400 5.0kb downstream 5.0kb downstream 18392 true Chr20: 42596782-42615173 Glycine max
Glyma.20G187400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42610174-42615173 Glycine max
Glyma.20G187400 10.0kb upstream 10.0kb upstream 23392 true Chr20: 42586782-42610173 Glycine max
Glyma.20G187400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42586782-42596781 Glycine max
Glyma.20G187400 10.0kb downstream 10.0kb downstream 23392 true Chr20: 42596782-42620173 Glycine max
Glyma.20G187400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42610174-42620173 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311374 5265 Fabidae View MSA
124072295 5270 Rosid View MSA
123753017 5271 Pentapetalae View MSA
122797089 5272 Eudicot View MSA
122051259 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.06289 0.0 21.1413    
cufflinks 3.32197 0.0 12.2634    
cufflinks 12.3831 0.0 46.8593   High
cufflinks 10.2266 0.0 32.3686   High
cufflinks 0.175992 0.0 0.840133 Low Low
cufflinks 0.236589 0.0 1.07119 Low Low
cufflinks 0.952283 0.0 4.22639    
cufflinks 3.33642 0.0 11.0324    
cufflinks 0.420361 0.0 2.54033    
cufflinks 0.681        
cufflinks 0.01     Low Low
cufflinks 2.898       High
cufflinks 0.018     Low Low
cufflinks 0.016     Low Low
cufflinks 0.062        
cufflinks 0.364        
cufflinks 0.083        
cufflinks 3.723       High
cufflinks 1.643       High
cufflinks 0.34        
cufflinks 0.014     Low Low
cufflinks 0.657        
cufflinks 0.541        
cufflinks 0.01     Low Low
cufflinks 0.655        
cufflinks 0.032     Low  

0 Strain