Gene : Glyma.20G187500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21596//PTHR21596:SF14 - RIBONUCLEASE P SUBUNIT P38 Genomic Order:  1875
Name:  ? Glyma.20G187500 Secondary Identifier:  ? PAC:30521149
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G187500 0.5kb upstream 0.5kb upstream 5772 true Chr20: 42611218-42616989 Glycine max
Glyma.20G187500 0.5kb upstream 0.5kb upstream 500 false Chr20: 42616490-42616989 Glycine max
Glyma.20G187500 0.5kb downstream 0.5kb downstream 5772 true Chr20: 42610718-42616489 Glycine max
Glyma.20G187500 0.5kb downstream 0.5kb downstream 500 false Chr20: 42610718-42611217 Glycine max
Glyma.20G187500 1.0kb upstream 1.0kb upstream 6272 true Chr20: 42611218-42617489 Glycine max
Glyma.20G187500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42616490-42617489 Glycine max
Glyma.20G187500 1.0kb downstream 1.0kb downstream 6272 true Chr20: 42610218-42616489 Glycine max
Glyma.20G187500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42610218-42611217 Glycine max
Glyma.20G187500 2.0kb upstream 2.0kb upstream 7272 true Chr20: 42611218-42618489 Glycine max
Glyma.20G187500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42616490-42618489 Glycine max
Glyma.20G187500 2.0kb downstream 2.0kb downstream 7272 true Chr20: 42609218-42616489 Glycine max
Glyma.20G187500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42609218-42611217 Glycine max
Glyma.20G187500 5.0kb upstream 5.0kb upstream 10272 true Chr20: 42611218-42621489 Glycine max
Glyma.20G187500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42616490-42621489 Glycine max
Glyma.20G187500 5.0kb downstream 5.0kb downstream 10272 true Chr20: 42606218-42616489 Glycine max
Glyma.20G187500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42606218-42611217 Glycine max
Glyma.20G187500 10.0kb upstream 10.0kb upstream 15272 true Chr20: 42611218-42626489 Glycine max
Glyma.20G187500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42616490-42626489 Glycine max
Glyma.20G187500 10.0kb downstream 10.0kb downstream 15272 true Chr20: 42601218-42616489 Glycine max
Glyma.20G187500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42601218-42611217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302905 5265 Fabidae View MSA
124074595 5270 Rosid View MSA
123742746 5271 Pentapetalae View MSA
122795667 5272 Eudicot View MSA
122048757 5273 Angiosperm View MSA
121350622 5274 Embryophyte View MSA
123381820 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.88844 0.0 20.203   High
cufflinks 4.46479 0.0 15.5706    
cufflinks 6.46465 0.0 21.8748   High
cufflinks 4.36913 0.0 15.2596    
cufflinks 4.3196 0.0 15.1937    
cufflinks 5.37647 0.0 18.3581    
cufflinks 4.72555 0.0 16.3671    
cufflinks 4.57708 0.0 15.877    
cufflinks 4.84896 0.0 16.7822    
cufflinks 2.136       Low
cufflinks 4.185       High
cufflinks 3.11        
cufflinks 3.11        
cufflinks 3.164        
cufflinks 4.837       High
cufflinks 3.598        
cufflinks 2.265       Low
cufflinks 2.924        
cufflinks 3.298        
cufflinks 3.601        
cufflinks 3.624        
cufflinks 4.105        
cufflinks 3.603        
cufflinks 4.035        
cufflinks 3.562        
cufflinks 3.68        

0 Strain