Gene : Glyma.20G187600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21470//PTHR21470:SF3 - NTKL-BINDING PROTEIN 1 Genomic Order:  1876
Name:  ? Glyma.20G187600 Secondary Identifier:  ? PAC:30519925
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G187600 0.5kb upstream 0.5kb upstream 2585 true Chr20: 42618653-42621237 Glycine max
Glyma.20G187600 0.5kb upstream 0.5kb upstream 500 false Chr20: 42618653-42619152 Glycine max
Glyma.20G187600 0.5kb downstream 0.5kb downstream 2585 true Chr20: 42619153-42621737 Glycine max
Glyma.20G187600 0.5kb downstream 0.5kb downstream 500 false Chr20: 42621238-42621737 Glycine max
Glyma.20G187600 1.0kb upstream 1.0kb upstream 3085 true Chr20: 42618153-42621237 Glycine max
Glyma.20G187600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42618153-42619152 Glycine max
Glyma.20G187600 1.0kb downstream 1.0kb downstream 3085 true Chr20: 42619153-42622237 Glycine max
Glyma.20G187600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42621238-42622237 Glycine max
Glyma.20G187600 2.0kb upstream 2.0kb upstream 4085 true Chr20: 42617153-42621237 Glycine max
Glyma.20G187600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42617153-42619152 Glycine max
Glyma.20G187600 2.0kb downstream 2.0kb downstream 4085 true Chr20: 42619153-42623237 Glycine max
Glyma.20G187600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42621238-42623237 Glycine max
Glyma.20G187600 5.0kb upstream 5.0kb upstream 7085 true Chr20: 42614153-42621237 Glycine max
Glyma.20G187600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42614153-42619152 Glycine max
Glyma.20G187600 5.0kb downstream 5.0kb downstream 7085 true Chr20: 42619153-42626237 Glycine max
Glyma.20G187600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42621238-42626237 Glycine max
Glyma.20G187600 10.0kb upstream 10.0kb upstream 12085 true Chr20: 42609153-42621237 Glycine max
Glyma.20G187600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42609153-42619152 Glycine max
Glyma.20G187600 10.0kb downstream 10.0kb downstream 12085 true Chr20: 42619153-42631237 Glycine max
Glyma.20G187600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42621238-42631237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300513 5265 Fabidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0368814 0.0 0.15717 Low  
cufflinks 0.302416 0.0 1.16468   High
cufflinks 0.0330415 0.0 0.141373 Low  
cufflinks 0.193524 0.0 0.758191   High
cufflinks 0.0472175 0.0 0.197598 Low  
cufflinks 0.138418 0.0 0.549729 Low  
cufflinks 0.0164546 0.0 0.0753656 Low Low
cufflinks 0.141725 0.0 0.561596 Low  
cufflinks 0.0551892 0.0 0.228452 Low  
cufflinks 0.452        
cufflinks 0.151        
cufflinks 0.094     Low  
cufflinks 0.197        
cufflinks 0.137        
cufflinks 0.026     Low Low
cufflinks 0.627       High
cufflinks 0.03     Low Low
cufflinks 0.446        
cufflinks 0.142        
cufflinks 0.808       High
cufflinks 0.086        
cufflinks 0.499        
cufflinks 0.424        
cufflinks 0.044     Low Low
cufflinks 0.688       High
cufflinks 0.056     Low Low

0 Strain