Gene : Glyma.20G187700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23244:SF262 - KELCH DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1877
Name:  ? Glyma.20G187700 Secondary Identifier:  ? PAC:30520105
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G187700 0.5kb upstream 0.5kb upstream 8746 true Chr20: 42622307-42631052 Glycine max
Glyma.20G187700 0.5kb upstream 0.5kb upstream 500 false Chr20: 42630553-42631052 Glycine max
Glyma.20G187700 0.5kb downstream 0.5kb downstream 8746 true Chr20: 42621807-42630552 Glycine max
Glyma.20G187700 0.5kb downstream 0.5kb downstream 500 false Chr20: 42621807-42622306 Glycine max
Glyma.20G187700 1.0kb upstream 1.0kb upstream 9246 true Chr20: 42622307-42631552 Glycine max
Glyma.20G187700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42630553-42631552 Glycine max
Glyma.20G187700 1.0kb downstream 1.0kb downstream 9246 true Chr20: 42621307-42630552 Glycine max
Glyma.20G187700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42621307-42622306 Glycine max
Glyma.20G187700 2.0kb upstream 2.0kb upstream 10246 true Chr20: 42622307-42632552 Glycine max
Glyma.20G187700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42630553-42632552 Glycine max
Glyma.20G187700 2.0kb downstream 2.0kb downstream 10246 true Chr20: 42620307-42630552 Glycine max
Glyma.20G187700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42620307-42622306 Glycine max
Glyma.20G187700 5.0kb upstream 5.0kb upstream 13246 true Chr20: 42622307-42635552 Glycine max
Glyma.20G187700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42630553-42635552 Glycine max
Glyma.20G187700 5.0kb downstream 5.0kb downstream 13246 true Chr20: 42617307-42630552 Glycine max
Glyma.20G187700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42617307-42622306 Glycine max
Glyma.20G187700 10.0kb upstream 10.0kb upstream 18246 true Chr20: 42622307-42640552 Glycine max
Glyma.20G187700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42630553-42640552 Glycine max
Glyma.20G187700 10.0kb downstream 10.0kb downstream 18246 true Chr20: 42612307-42630552 Glycine max
Glyma.20G187700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42612307-42622306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041060 5273 Angiosperm View MSA
122299331 5265 Fabidae View MSA
124063985 5270 Rosid View MSA
123738667 5271 Pentapetalae View MSA
122788707 5272 Eudicot View MSA
121344753 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.68171 0.0 27.9109   Low
cufflinks 7.63264 0.0 27.7598   Low
cufflinks 7.73245 0.0 27.9154   Low
cufflinks 9.78901 0.0 34.3902   High
cufflinks 9.40754 0.0 33.2052    
cufflinks 9.66305 0.0 33.9411    
cufflinks 9.85025 0.0 34.5898   High
cufflinks 8.37984 0.0 29.9558    
cufflinks 8.9726 0.0 31.9627    
cufflinks 1.019        
cufflinks 0.505       Low
cufflinks 1.077        
cufflinks 1.18        
cufflinks 1.239       High
cufflinks 0.701       Low
cufflinks 1.075        
cufflinks 0.769        
cufflinks 1.214       High
cufflinks 1.204        
cufflinks 1.079        
cufflinks 0.69       Low
cufflinks 1.135        
cufflinks 0.916        
cufflinks 0.768        
cufflinks 1.072        
cufflinks 0.735        

0 Strain