Gene : Glyma.20G189100 G. max Wm82.a2.v1
Defline:  (1 of 2) 3.1.3.64 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase Genomic Order:  1891
Name:  ? Glyma.20G189100 Secondary Identifier:  ? PAC:30519964
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6367 Glycine max pathologic  
Gmax PWY-6368 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G189100 0.5kb upstream 0.5kb upstream 13782 true Chr20: 42762367-42776148 Glycine max
Glyma.20G189100 0.5kb upstream 0.5kb upstream 500 false Chr20: 42775649-42776148 Glycine max
Glyma.20G189100 0.5kb downstream 0.5kb downstream 13782 true Chr20: 42761867-42775648 Glycine max
Glyma.20G189100 0.5kb downstream 0.5kb downstream 500 false Chr20: 42761867-42762366 Glycine max
Glyma.20G189100 1.0kb upstream 1.0kb upstream 14282 true Chr20: 42762367-42776648 Glycine max
Glyma.20G189100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42775649-42776648 Glycine max
Glyma.20G189100 1.0kb downstream 1.0kb downstream 14282 true Chr20: 42761367-42775648 Glycine max
Glyma.20G189100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42761367-42762366 Glycine max
Glyma.20G189100 2.0kb upstream 2.0kb upstream 15282 true Chr20: 42762367-42777648 Glycine max
Glyma.20G189100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42775649-42777648 Glycine max
Glyma.20G189100 2.0kb downstream 2.0kb downstream 15282 true Chr20: 42760367-42775648 Glycine max
Glyma.20G189100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42760367-42762366 Glycine max
Glyma.20G189100 5.0kb upstream 5.0kb upstream 18282 true Chr20: 42762367-42780648 Glycine max
Glyma.20G189100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42775649-42780648 Glycine max
Glyma.20G189100 5.0kb downstream 5.0kb downstream 18282 true Chr20: 42757367-42775648 Glycine max
Glyma.20G189100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42757367-42762366 Glycine max
Glyma.20G189100 10.0kb upstream 10.0kb upstream 23282 true Chr20: 42762367-42785648 Glycine max
Glyma.20G189100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42775649-42785648 Glycine max
Glyma.20G189100 10.0kb downstream 10.0kb downstream 23282 true Chr20: 42752367-42775648 Glycine max
Glyma.20G189100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42752367-42762366 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303709 5265 Fabidae View MSA
124069082 5270 Rosid View MSA
123744322 5271 Pentapetalae View MSA
122796754 5272 Eudicot View MSA
122047455 5273 Angiosperm View MSA
121350859 5274 Embryophyte View MSA
123381910 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.04681 0.0 15.2876    
cufflinks 2.35871 0.0 8.83227    
cufflinks 5.65411 0.0 24.6232   High
cufflinks 3.52595 0.0 15.5326    
cufflinks 2.30091 0.0 10.2303    
cufflinks 2.45763 0.0 9.0082    
cufflinks 3.43941 0.0 11.5986    
cufflinks 2.66476 0.0 11.5092    
cufflinks 2.51311 0.0 10.8338    
cufflinks 0.087     Low Low
cufflinks 0.214        
cufflinks 0.237        
cufflinks 0.101       Low
cufflinks 0.079       Low
cufflinks 0.252        
cufflinks 0.21        
cufflinks 0.129        
cufflinks 0.242        
cufflinks 0.169        
cufflinks 0.225        
cufflinks 0.221        
cufflinks 0.206        
cufflinks 0.174        
cufflinks 0.222        
cufflinks 0.215        
cufflinks 0.201        

0 Strain