Gene : Glyma.20G189300 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11817//PTHR11817:SF33 - PYRUVATE KINASE Genomic Order:  1893
Name:  ? Glyma.20G189300 Secondary Identifier:  ? PAC:30523112
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G189300 0.5kb upstream 0.5kb upstream 9892 true Chr20: 42789086-42798977 Glycine max
Glyma.20G189300 0.5kb upstream 0.5kb upstream 500 false Chr20: 42789086-42789585 Glycine max
Glyma.20G189300 0.5kb downstream 0.5kb downstream 9892 true Chr20: 42789586-42799477 Glycine max
Glyma.20G189300 0.5kb downstream 0.5kb downstream 500 false Chr20: 42798978-42799477 Glycine max
Glyma.20G189300 1.0kb upstream 1.0kb upstream 10392 true Chr20: 42788586-42798977 Glycine max
Glyma.20G189300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42788586-42789585 Glycine max
Glyma.20G189300 1.0kb downstream 1.0kb downstream 10392 true Chr20: 42789586-42799977 Glycine max
Glyma.20G189300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42798978-42799977 Glycine max
Glyma.20G189300 2.0kb upstream 2.0kb upstream 11392 true Chr20: 42787586-42798977 Glycine max
Glyma.20G189300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42787586-42789585 Glycine max
Glyma.20G189300 2.0kb downstream 2.0kb downstream 11392 true Chr20: 42789586-42800977 Glycine max
Glyma.20G189300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42798978-42800977 Glycine max
Glyma.20G189300 5.0kb upstream 5.0kb upstream 14392 true Chr20: 42784586-42798977 Glycine max
Glyma.20G189300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42784586-42789585 Glycine max
Glyma.20G189300 5.0kb downstream 5.0kb downstream 14392 true Chr20: 42789586-42803977 Glycine max
Glyma.20G189300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42798978-42803977 Glycine max
Glyma.20G189300 10.0kb upstream 10.0kb upstream 19392 true Chr20: 42779586-42798977 Glycine max
Glyma.20G189300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42779586-42789585 Glycine max
Glyma.20G189300 10.0kb downstream 10.0kb downstream 19392 true Chr20: 42789586-42808977 Glycine max
Glyma.20G189300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42798978-42808977 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314585 5265 Fabidae View MSA
124072405 5270 Rosid View MSA
123746399 5271 Pentapetalae View MSA
122796515 5272 Eudicot View MSA
122046004 5273 Angiosperm View MSA
121344818 5274 Embryophyte View MSA
123427832 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9736 0.0 55.4615   Low
cufflinks 51.3799 0.0 199.078 High  
cufflinks 12.2446 0.0 40.6682   Low
cufflinks 59.7074 0.0 241.852 High  
cufflinks 77.7634 0.0 373.393 High High
cufflinks 45.7058 0.0 170.525 High  
cufflinks 23.6361 0.0 77.8282 High  
cufflinks 59.4902 0.0 302.067 High  
cufflinks 56.7351 0.0 283.27 High  
cufflinks 4.701        
cufflinks 19.265     High High
cufflinks 1.782        
cufflinks 7.135        
cufflinks 10.764     High  
cufflinks 13.156     High  
cufflinks 2.013        
cufflinks 4.698        
cufflinks 3.078        
cufflinks 3.409        
cufflinks 1.299       Low
cufflinks 40.469     High High
cufflinks 1.591       Low
cufflinks 0.965       Low
cufflinks 14.907     High  
cufflinks 1.579       Low
cufflinks 20.678     High High

0 Strain