Gene : Glyma.20G189500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  1895
Name:  ? Glyma.20G189500 Secondary Identifier:  ? PAC:30522704
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5173 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PYRUVDEHYD-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G189500 0.5kb upstream 0.5kb upstream 15723 true Chr20: 42799732-42815454 Glycine max
Glyma.20G189500 0.5kb upstream 0.5kb upstream 500 false Chr20: 42814955-42815454 Glycine max
Glyma.20G189500 0.5kb downstream 0.5kb downstream 15723 true Chr20: 42799232-42814954 Glycine max
Glyma.20G189500 0.5kb downstream 0.5kb downstream 500 false Chr20: 42799232-42799731 Glycine max
Glyma.20G189500 1.0kb upstream 1.0kb upstream 16223 true Chr20: 42799732-42815954 Glycine max
Glyma.20G189500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42814955-42815954 Glycine max
Glyma.20G189500 1.0kb downstream 1.0kb downstream 16223 true Chr20: 42798732-42814954 Glycine max
Glyma.20G189500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42798732-42799731 Glycine max
Glyma.20G189500 2.0kb upstream 2.0kb upstream 17223 true Chr20: 42799732-42816954 Glycine max
Glyma.20G189500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42814955-42816954 Glycine max
Glyma.20G189500 2.0kb downstream 2.0kb downstream 17223 true Chr20: 42797732-42814954 Glycine max
Glyma.20G189500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42797732-42799731 Glycine max
Glyma.20G189500 5.0kb upstream 5.0kb upstream 20223 true Chr20: 42799732-42819954 Glycine max
Glyma.20G189500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42814955-42819954 Glycine max
Glyma.20G189500 5.0kb downstream 5.0kb downstream 20223 true Chr20: 42794732-42814954 Glycine max
Glyma.20G189500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42794732-42799731 Glycine max
Glyma.20G189500 10.0kb upstream 10.0kb upstream 25223 true Chr20: 42799732-42824954 Glycine max
Glyma.20G189500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42814955-42824954 Glycine max
Glyma.20G189500 10.0kb downstream 10.0kb downstream 25223 true Chr20: 42789732-42814954 Glycine max
Glyma.20G189500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42789732-42799731 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
122303087 5265 Fabidae View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1756 0.0 49.0891   High
cufflinks 8.01935 0.0 21.5081    
cufflinks 7.8836 0.0 21.1376   Low
cufflinks 8.75493 0.0 23.4174    
cufflinks 17.5878 0.0 47.3991   High
cufflinks 16.4706 0.0 44.2844   High
cufflinks 8.96793 0.0 23.9995    
cufflinks 9.81533 0.0 26.2011    
cufflinks 11.8272 0.0 31.5601    
cufflinks 2.321        
cufflinks 1.412        
cufflinks 1.438        
cufflinks 3.793       High
cufflinks 4.197       High
cufflinks 1.681        
cufflinks 1.462        
cufflinks 1.728        
cufflinks 2.052        
cufflinks 1.725        
cufflinks 1.281       Low
cufflinks 1.928        
cufflinks 1.488        
cufflinks 1.694        
cufflinks 1.995        
cufflinks 1.415        
cufflinks 2.258        

0 Strain