Gene : Glyma.20G190500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12526//PTHR12526:SF354 - GLYCOSYLTRANSFERASE Genomic Order:  1905
Name:  ? Glyma.20G190500 Secondary Identifier:  ? PAC:30522039
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G190500 0.5kb upstream 0.5kb upstream 10726 true Chr20: 42924170-42934895 Glycine max
Glyma.20G190500 0.5kb upstream 0.5kb upstream 500 false Chr20: 42924170-42924669 Glycine max
Glyma.20G190500 0.5kb downstream 0.5kb downstream 10726 true Chr20: 42924670-42935395 Glycine max
Glyma.20G190500 0.5kb downstream 0.5kb downstream 500 false Chr20: 42934896-42935395 Glycine max
Glyma.20G190500 1.0kb upstream 1.0kb upstream 11226 true Chr20: 42923670-42934895 Glycine max
Glyma.20G190500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42923670-42924669 Glycine max
Glyma.20G190500 1.0kb downstream 1.0kb downstream 11226 true Chr20: 42924670-42935895 Glycine max
Glyma.20G190500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42934896-42935895 Glycine max
Glyma.20G190500 2.0kb upstream 2.0kb upstream 12226 true Chr20: 42922670-42934895 Glycine max
Glyma.20G190500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42922670-42924669 Glycine max
Glyma.20G190500 2.0kb downstream 2.0kb downstream 12226 true Chr20: 42924670-42936895 Glycine max
Glyma.20G190500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42934896-42936895 Glycine max
Glyma.20G190500 5.0kb upstream 5.0kb upstream 15226 true Chr20: 42919670-42934895 Glycine max
Glyma.20G190500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42919670-42924669 Glycine max
Glyma.20G190500 5.0kb downstream 5.0kb downstream 15226 true Chr20: 42924670-42939895 Glycine max
Glyma.20G190500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42934896-42939895 Glycine max
Glyma.20G190500 10.0kb upstream 10.0kb upstream 20226 true Chr20: 42914670-42934895 Glycine max
Glyma.20G190500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42914670-42924669 Glycine max
Glyma.20G190500 10.0kb downstream 10.0kb downstream 20226 true Chr20: 42924670-42944895 Glycine max
Glyma.20G190500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42934896-42944895 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309093 5265 Fabidae View MSA
124067437 5270 Rosid View MSA
123740288 5271 Pentapetalae View MSA
122789859 5272 Eudicot View MSA
122043376 5273 Angiosperm View MSA
121346761 5274 Embryophyte View MSA
123380440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.98759 0.0 5.73021    
cufflinks 1.51423 0.0 4.53376   Low
cufflinks 1.7767 0.0 5.19161    
cufflinks 2.24577 0.0 6.38534    
cufflinks 2.63169 0.0 7.35463   High
cufflinks 1.67284 0.0 4.92699   Low
cufflinks 2.1911 0.0 6.25294    
cufflinks 2.74494 0.0 7.65056   High
cufflinks 2.21588 0.0 6.31091    
cufflinks 1.649       High
cufflinks 0.553       Low
cufflinks 1.255        
cufflinks 1.62       High
cufflinks 2.081       High
cufflinks 0.789        
cufflinks 1.215        
cufflinks 0.534       Low
cufflinks 1.912       High
cufflinks 1.242        
cufflinks 1.021        
cufflinks 0.682       Low
cufflinks 1.256        
cufflinks 1.13        
cufflinks 0.812        
cufflinks 1.061        
cufflinks 0.63       Low

0 Strain