Gene : Glyma.20G191400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10044:SF127 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  1914
Name:  ? Glyma.20G191400 Secondary Identifier:  ? PAC:30520211
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G191400 0.5kb upstream 0.5kb upstream 6972 true Chr20: 43005971-43012942 Glycine max
Glyma.20G191400 0.5kb upstream 0.5kb upstream 500 false Chr20: 43012443-43012942 Glycine max
Glyma.20G191400 0.5kb downstream 0.5kb downstream 6972 true Chr20: 43005471-43012442 Glycine max
Glyma.20G191400 0.5kb downstream 0.5kb downstream 500 false Chr20: 43005471-43005970 Glycine max
Glyma.20G191400 1.0kb upstream 1.0kb upstream 7472 true Chr20: 43005971-43013442 Glycine max
Glyma.20G191400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43012443-43013442 Glycine max
Glyma.20G191400 1.0kb downstream 1.0kb downstream 7472 true Chr20: 43004971-43012442 Glycine max
Glyma.20G191400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43004971-43005970 Glycine max
Glyma.20G191400 2.0kb upstream 2.0kb upstream 8472 true Chr20: 43005971-43014442 Glycine max
Glyma.20G191400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43012443-43014442 Glycine max
Glyma.20G191400 2.0kb downstream 2.0kb downstream 8472 true Chr20: 43003971-43012442 Glycine max
Glyma.20G191400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43003971-43005970 Glycine max
Glyma.20G191400 5.0kb upstream 5.0kb upstream 11472 true Chr20: 43005971-43017442 Glycine max
Glyma.20G191400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43012443-43017442 Glycine max
Glyma.20G191400 5.0kb downstream 5.0kb downstream 11472 true Chr20: 43000971-43012442 Glycine max
Glyma.20G191400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43000971-43005970 Glycine max
Glyma.20G191400 10.0kb upstream 10.0kb upstream 16472 true Chr20: 43005971-43022442 Glycine max
Glyma.20G191400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43012443-43022442 Glycine max
Glyma.20G191400 10.0kb downstream 10.0kb downstream 16472 true Chr20: 42995971-43012442 Glycine max
Glyma.20G191400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42995971-43005970 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301947 5265 Fabidae View MSA
124065463 5270 Rosid View MSA
123737422 5271 Pentapetalae View MSA
122787073 5272 Eudicot View MSA
122041881 5273 Angiosperm View MSA
121350906 5274 Embryophyte View MSA
123381933 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.92276 0.0 20.34    
cufflinks 4.53508 0.0 16.0176   Low
cufflinks 14.3009 0.0 51.4881   High
cufflinks 5.53655 0.0 19.1388    
cufflinks 7.51099 0.0 25.6192    
cufflinks 6.70712 0.0 22.9267    
cufflinks 4.83427 0.0 17.0405   Low
cufflinks 8.43802 0.0 28.8019    
cufflinks 13.0073 0.0 45.8594   High
cufflinks 2.223        
cufflinks 2.534        
cufflinks 5.08       High
cufflinks 2.0        
cufflinks 1.84        
cufflinks 3.22        
cufflinks 2.885        
cufflinks 1.094       Low
cufflinks 3.07        
cufflinks 2.671        
cufflinks 2.78        
cufflinks 2.111        
cufflinks 2.945        
cufflinks 2.351        
cufflinks 3.433        
cufflinks 2.793        
cufflinks 1.889        

0 Strain