Gene : Glyma.20G224800 G. max Wm82.a2.v1
Defline:  (1 of 2) PF07823 - Cyclic phosphodiesterase-like protein Genomic Order:  2248
Name:  ? Glyma.20G224800 Secondary Identifier:  ? PAC:30522748
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G224800 0.5kb upstream 0.5kb upstream 1603 true Chr20: 45934836-45936438 Glycine max
Glyma.20G224800 0.5kb upstream 0.5kb upstream 500 false Chr20: 45934836-45935335 Glycine max
Glyma.20G224800 0.5kb downstream 0.5kb downstream 1603 true Chr20: 45935336-45936938 Glycine max
Glyma.20G224800 0.5kb downstream 0.5kb downstream 500 false Chr20: 45936439-45936938 Glycine max
Glyma.20G224800 1.0kb upstream 1.0kb upstream 2103 true Chr20: 45934336-45936438 Glycine max
Glyma.20G224800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45934336-45935335 Glycine max
Glyma.20G224800 1.0kb downstream 1.0kb downstream 2103 true Chr20: 45935336-45937438 Glycine max
Glyma.20G224800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45936439-45937438 Glycine max
Glyma.20G224800 2.0kb upstream 2.0kb upstream 3103 true Chr20: 45933336-45936438 Glycine max
Glyma.20G224800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45933336-45935335 Glycine max
Glyma.20G224800 2.0kb downstream 2.0kb downstream 3103 true Chr20: 45935336-45938438 Glycine max
Glyma.20G224800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45936439-45938438 Glycine max
Glyma.20G224800 5.0kb upstream 5.0kb upstream 6103 true Chr20: 45930336-45936438 Glycine max
Glyma.20G224800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45930336-45935335 Glycine max
Glyma.20G224800 5.0kb downstream 5.0kb downstream 6103 true Chr20: 45935336-45941438 Glycine max
Glyma.20G224800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45936439-45941438 Glycine max
Glyma.20G224800 10.0kb upstream 10.0kb upstream 11103 true Chr20: 45925336-45936438 Glycine max
Glyma.20G224800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45925336-45935335 Glycine max
Glyma.20G224800 10.0kb downstream 10.0kb downstream 11103 true Chr20: 45935336-45946438 Glycine max
Glyma.20G224800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45936439-45946438 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791954 5273 Angiosperm View MSA
122237943 5265 Fabidae Singleton cluster - no MSA
124050533 5270 Rosid View MSA
123619814 5271 Pentapetalae View MSA
122795570 5272 Eudicot View MSA
121063221 5274 Embryophyte View MSA
123102987 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176801 0.0 0.729851 Low Low
cufflinks 0.456563 0.0 1.76923    
cufflinks 0.142822 0.0 0.572012 Low Low
cufflinks 0.713526 0.0 2.76561    
cufflinks 0.651311 0.0 3.19708    
cufflinks 0.702507 0.0 2.72398    
cufflinks 0.263882 0.0 1.02925    
cufflinks 1.55844 0.0 6.90006   High
cufflinks 0.546952 0.0 2.17112    
cufflinks 0.793       High
cufflinks 0.329        
cufflinks 0.139        
cufflinks 0.246        
cufflinks 0.265        
cufflinks 0.052     Low Low
cufflinks 0.189        
cufflinks 0.086       Low
cufflinks 0.222        
cufflinks 0.262        
cufflinks 0.225        
cufflinks 0.315        
cufflinks 0.258        
cufflinks 0.237        
cufflinks 0.331        
cufflinks 0.134        
cufflinks 0.078       Low

0 Strain