Gene : Glyma.20G225500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21100:SF9 - PREFOLDIN SUBUNIT 4 Genomic Order:  2255
Name:  ? Glyma.20G225500 Secondary Identifier:  ? PAC:30523208
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G225500 0.5kb upstream 0.5kb upstream 2034 true Chr20: 45973456-45975489 Glycine max
Glyma.20G225500 0.5kb upstream 0.5kb upstream 500 false Chr20: 45973456-45973955 Glycine max
Glyma.20G225500 0.5kb downstream 0.5kb downstream 2034 true Chr20: 45973956-45975989 Glycine max
Glyma.20G225500 0.5kb downstream 0.5kb downstream 500 false Chr20: 45975490-45975989 Glycine max
Glyma.20G225500 1.0kb upstream 1.0kb upstream 2534 true Chr20: 45972956-45975489 Glycine max
Glyma.20G225500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45972956-45973955 Glycine max
Glyma.20G225500 1.0kb downstream 1.0kb downstream 2534 true Chr20: 45973956-45976489 Glycine max
Glyma.20G225500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45975490-45976489 Glycine max
Glyma.20G225500 2.0kb upstream 2.0kb upstream 3534 true Chr20: 45971956-45975489 Glycine max
Glyma.20G225500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45971956-45973955 Glycine max
Glyma.20G225500 2.0kb downstream 2.0kb downstream 3534 true Chr20: 45973956-45977489 Glycine max
Glyma.20G225500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45975490-45977489 Glycine max
Glyma.20G225500 5.0kb upstream 5.0kb upstream 6534 true Chr20: 45968956-45975489 Glycine max
Glyma.20G225500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45968956-45973955 Glycine max
Glyma.20G225500 5.0kb downstream 5.0kb downstream 6534 true Chr20: 45973956-45980489 Glycine max
Glyma.20G225500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45975490-45980489 Glycine max
Glyma.20G225500 10.0kb upstream 10.0kb upstream 11534 true Chr20: 45963956-45975489 Glycine max
Glyma.20G225500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45963956-45973955 Glycine max
Glyma.20G225500 10.0kb downstream 10.0kb downstream 11534 true Chr20: 45973956-45985489 Glycine max
Glyma.20G225500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45975490-45985489 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304658 5265 Fabidae View MSA
124063538 5270 Rosid View MSA
123738844 5271 Pentapetalae View MSA
122790794 5272 Eudicot View MSA
122043024 5273 Angiosperm View MSA
121347563 5274 Embryophyte View MSA
123426081 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.5543 0.0 77.0136 High  
cufflinks 23.7542 0.0 64.6602 High  
cufflinks 14.0295 0.0 39.9384   Low
cufflinks 26.485 0.0 71.5795 High  
cufflinks 25.9968 0.0 70.4381 High  
cufflinks 28.1702 0.0 76.0399 High  
cufflinks 33.769 0.0 90.5292 High High
cufflinks 27.8673 0.0 75.1499 High  
cufflinks 27.462 0.0 74.1647 High  
cufflinks 14.376     High  
cufflinks 5.684     High Low
cufflinks 12.482     High  
cufflinks 22.52     High High
cufflinks 30.145     High High
cufflinks 3.24       Low
cufflinks 9.127     High  
cufflinks 12.41     High  
cufflinks 13.131     High  
cufflinks 12.202     High  
cufflinks 8.353     High  
cufflinks 7.739     High  
cufflinks 9.4     High  
cufflinks 12.987     High  
cufflinks 9.289     High  
cufflinks 8.42     High  
cufflinks 8.58     High  

0 Strain