Gene : Glyma.20G226000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31358:SF4 - PROTEIN WAVE-DAMPENED 2-RELATED Genomic Order:  2260
Name:  ? Glyma.20G226000 Secondary Identifier:  ? PAC:30522274
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G226000 0.5kb upstream 0.5kb upstream 4607 true Chr20: 46000712-46005318 Glycine max
Glyma.20G226000 0.5kb upstream 0.5kb upstream 500 false Chr20: 46004819-46005318 Glycine max
Glyma.20G226000 0.5kb downstream 0.5kb downstream 4607 true Chr20: 46000212-46004818 Glycine max
Glyma.20G226000 0.5kb downstream 0.5kb downstream 500 false Chr20: 46000212-46000711 Glycine max
Glyma.20G226000 1.0kb upstream 1.0kb upstream 5107 true Chr20: 46000712-46005818 Glycine max
Glyma.20G226000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46004819-46005818 Glycine max
Glyma.20G226000 1.0kb downstream 1.0kb downstream 5107 true Chr20: 45999712-46004818 Glycine max
Glyma.20G226000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45999712-46000711 Glycine max
Glyma.20G226000 2.0kb upstream 2.0kb upstream 6107 true Chr20: 46000712-46006818 Glycine max
Glyma.20G226000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46004819-46006818 Glycine max
Glyma.20G226000 2.0kb downstream 2.0kb downstream 6107 true Chr20: 45998712-46004818 Glycine max
Glyma.20G226000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45998712-46000711 Glycine max
Glyma.20G226000 5.0kb upstream 5.0kb upstream 9107 true Chr20: 46000712-46009818 Glycine max
Glyma.20G226000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46004819-46009818 Glycine max
Glyma.20G226000 5.0kb downstream 5.0kb downstream 9107 true Chr20: 45995712-46004818 Glycine max
Glyma.20G226000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45995712-46000711 Glycine max
Glyma.20G226000 10.0kb upstream 10.0kb upstream 14107 true Chr20: 46000712-46014818 Glycine max
Glyma.20G226000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46004819-46014818 Glycine max
Glyma.20G226000 10.0kb downstream 10.0kb downstream 14107 true Chr20: 45990712-46004818 Glycine max
Glyma.20G226000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45990712-46000711 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301422 5265 Fabidae View MSA
124062203 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97004 0.0 9.28002   Low
cufflinks 25.4817 0.0 89.4454 High  
cufflinks 5.53735 0.0 21.6117   Low
cufflinks 45.4755 0.0 178.11 High High
cufflinks 12.2178 0.0 42.1659    
cufflinks 8.18922 0.0 25.7503    
cufflinks 28.0476 0.0 99.3393 High  
cufflinks 35.8151 0.0 132.727 High  
cufflinks 14.5838 0.0 49.8917    
cufflinks 5.558        
cufflinks 0.893       Low
cufflinks 3.231        
cufflinks 2.609        
cufflinks 3.519        
cufflinks 2.309        
cufflinks 5.775        
cufflinks 2.238        
cufflinks 3.808        
cufflinks 8.132     High High
cufflinks 7.987     High High
cufflinks 1.39       Low
cufflinks 5.496        
cufflinks 5.315        
cufflinks 0.689       Low
cufflinks 7.143     High High
cufflinks 1.528        

0 Strain