Gene : Glyma.20G226100 G. max Wm82.a2.v1
Defline:  (1 of 15) PF01918 - Alba (Alba) Genomic Order:  2261
Name:  ? Glyma.20G226100 Secondary Identifier:  ? PAC:30520956
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G226100 0.5kb upstream 0.5kb upstream 2370 true Chr20: 46016789-46019158 Glycine max
Glyma.20G226100 0.5kb upstream 0.5kb upstream 500 false Chr20: 46016789-46017288 Glycine max
Glyma.20G226100 0.5kb downstream 0.5kb downstream 2370 true Chr20: 46017289-46019658 Glycine max
Glyma.20G226100 0.5kb downstream 0.5kb downstream 500 false Chr20: 46019159-46019658 Glycine max
Glyma.20G226100 1.0kb upstream 1.0kb upstream 2870 true Chr20: 46016289-46019158 Glycine max
Glyma.20G226100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46016289-46017288 Glycine max
Glyma.20G226100 1.0kb downstream 1.0kb downstream 2870 true Chr20: 46017289-46020158 Glycine max
Glyma.20G226100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46019159-46020158 Glycine max
Glyma.20G226100 2.0kb upstream 2.0kb upstream 3870 true Chr20: 46015289-46019158 Glycine max
Glyma.20G226100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46015289-46017288 Glycine max
Glyma.20G226100 2.0kb downstream 2.0kb downstream 3870 true Chr20: 46017289-46021158 Glycine max
Glyma.20G226100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46019159-46021158 Glycine max
Glyma.20G226100 5.0kb upstream 5.0kb upstream 6870 true Chr20: 46012289-46019158 Glycine max
Glyma.20G226100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46012289-46017288 Glycine max
Glyma.20G226100 5.0kb downstream 5.0kb downstream 6870 true Chr20: 46017289-46024158 Glycine max
Glyma.20G226100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46019159-46024158 Glycine max
Glyma.20G226100 10.0kb upstream 10.0kb upstream 11870 true Chr20: 46007289-46019158 Glycine max
Glyma.20G226100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46007289-46017288 Glycine max
Glyma.20G226100 10.0kb downstream 10.0kb downstream 11870 true Chr20: 46017289-46029158 Glycine max
Glyma.20G226100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46019159-46029158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299437 5265 Fabidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.253137 0.0 1.00856    
cufflinks 0.353076 0.0 1.38973    
cufflinks 1.02901 0.0 3.872   High
cufflinks 0.827788 0.0 3.14333   High
cufflinks 0.31241 0.0 1.23502    
cufflinks 0.806684 0.0 3.07081   High
cufflinks 0.264398 0.0 1.05241    
cufflinks 0.250243 0.0 0.99637    
cufflinks 0.322718 0.0 1.27459    
cufflinks 0.143        
cufflinks 0.466        
cufflinks 1.002        
cufflinks 0.017     Low Low
cufflinks 0.032     Low Low
cufflinks 0.205        
cufflinks 0.241        
cufflinks 1.262       High
cufflinks 4.937       High
cufflinks 0.076     Low  
cufflinks 0.244        
cufflinks 0.101        
cufflinks 0.286        
cufflinks 0.166        
cufflinks 0.755        
cufflinks 0.315        
cufflinks 1.439       High

0 Strain