Gene : Glyma.20G226500 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG3227 - Calcium-responsive transcription coactivator Genomic Order:  2265
Name:  ? Glyma.20G226500 Secondary Identifier:  ? PAC:30522783
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G226500 0.5kb upstream 0.5kb upstream 4219 true Chr20: 46057911-46062129 Glycine max
Glyma.20G226500 0.5kb upstream 0.5kb upstream 500 false Chr20: 46057911-46058410 Glycine max
Glyma.20G226500 0.5kb downstream 0.5kb downstream 4219 true Chr20: 46058411-46062629 Glycine max
Glyma.20G226500 0.5kb downstream 0.5kb downstream 500 false Chr20: 46062130-46062629 Glycine max
Glyma.20G226500 1.0kb upstream 1.0kb upstream 4719 true Chr20: 46057411-46062129 Glycine max
Glyma.20G226500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46057411-46058410 Glycine max
Glyma.20G226500 1.0kb downstream 1.0kb downstream 4719 true Chr20: 46058411-46063129 Glycine max
Glyma.20G226500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46062130-46063129 Glycine max
Glyma.20G226500 2.0kb upstream 2.0kb upstream 5719 true Chr20: 46056411-46062129 Glycine max
Glyma.20G226500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46056411-46058410 Glycine max
Glyma.20G226500 2.0kb downstream 2.0kb downstream 5719 true Chr20: 46058411-46064129 Glycine max
Glyma.20G226500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46062130-46064129 Glycine max
Glyma.20G226500 5.0kb upstream 5.0kb upstream 8719 true Chr20: 46053411-46062129 Glycine max
Glyma.20G226500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46053411-46058410 Glycine max
Glyma.20G226500 5.0kb downstream 5.0kb downstream 8719 true Chr20: 46058411-46067129 Glycine max
Glyma.20G226500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46062130-46067129 Glycine max
Glyma.20G226500 10.0kb upstream 10.0kb upstream 13719 true Chr20: 46048411-46062129 Glycine max
Glyma.20G226500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46048411-46058410 Glycine max
Glyma.20G226500 10.0kb downstream 10.0kb downstream 13719 true Chr20: 46058411-46072129 Glycine max
Glyma.20G226500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46062130-46072129 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308084 5265 Fabidae View MSA
124060849 5270 Rosid View MSA
123751553 5271 Pentapetalae View MSA
122791755 5272 Eudicot View MSA
122045386 5273 Angiosperm View MSA
121351391 5274 Embryophyte View MSA
123426567 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.287808 0.0 2.97967   Low
cufflinks 95.6651 0.0 452.524 High High
cufflinks 13.1313 0.0 60.3878    
cufflinks 15.0928 0.0 61.567    
cufflinks 7.62504 0.0 33.5641    
cufflinks 9.45716 0.0 37.6218    
cufflinks 106.727 0.0 491.883 High High
cufflinks 3.88041 0.0 17.5604    
cufflinks 4.1603 0.0 24.7138    
cufflinks 0.252        
cufflinks 0.117        
cufflinks 1.31       High
cufflinks 0.505        
cufflinks 0.568        
cufflinks 0.011     Low Low
cufflinks 0.586        
cufflinks 0.143        
cufflinks 0.354        
cufflinks 8.449     High High
cufflinks 0.242        
cufflinks 0.085        
cufflinks 0.401        
cufflinks 0.573        
cufflinks 0.085        
cufflinks 0.363        
cufflinks 0.161        

0 Strain