Gene : Glyma.20G220400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR27001:SF100 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  2204
Name:  ? Glyma.20G220400 Secondary Identifier:  ? PAC:30522736
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G220400 0.5kb upstream 0.5kb upstream 4638 true Chr20: 45558655-45563292 Glycine max
Glyma.20G220400 0.5kb upstream 0.5kb upstream 500 false Chr20: 45558655-45559154 Glycine max
Glyma.20G220400 0.5kb downstream 0.5kb downstream 4638 true Chr20: 45559155-45563792 Glycine max
Glyma.20G220400 0.5kb downstream 0.5kb downstream 500 false Chr20: 45563293-45563792 Glycine max
Glyma.20G220400 1.0kb upstream 1.0kb upstream 5138 true Chr20: 45558155-45563292 Glycine max
Glyma.20G220400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45558155-45559154 Glycine max
Glyma.20G220400 1.0kb downstream 1.0kb downstream 5138 true Chr20: 45559155-45564292 Glycine max
Glyma.20G220400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45563293-45564292 Glycine max
Glyma.20G220400 2.0kb upstream 2.0kb upstream 6138 true Chr20: 45557155-45563292 Glycine max
Glyma.20G220400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45557155-45559154 Glycine max
Glyma.20G220400 2.0kb downstream 2.0kb downstream 6138 true Chr20: 45559155-45565292 Glycine max
Glyma.20G220400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45563293-45565292 Glycine max
Glyma.20G220400 5.0kb upstream 5.0kb upstream 9138 true Chr20: 45554155-45563292 Glycine max
Glyma.20G220400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45554155-45559154 Glycine max
Glyma.20G220400 5.0kb downstream 5.0kb downstream 9138 true Chr20: 45559155-45568292 Glycine max
Glyma.20G220400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45563293-45568292 Glycine max
Glyma.20G220400 10.0kb upstream 10.0kb upstream 14138 true Chr20: 45549155-45563292 Glycine max
Glyma.20G220400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45549155-45559154 Glycine max
Glyma.20G220400 10.0kb downstream 10.0kb downstream 14138 true Chr20: 45559155-45573292 Glycine max
Glyma.20G220400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45563293-45573292 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029673 5273 Angiosperm View MSA
122309563 5265 Fabidae View MSA
124072230 5270 Rosid View MSA
123746804 5271 Pentapetalae View MSA
122772037 5272 Eudicot View MSA
121298975 5274 Embryophyte View MSA
123336907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.8633 0.0 34.382   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0187945 0.0 0.0786522 Low  
cufflinks 0.013812 0.0 0.0591917 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0143545 0.0 0.0612102 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.192        
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.667        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain