Gene : Glyma.20G220800 G. max Wm82.a2.v1
Defline:  (1 of 24) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Genomic Order:  2208
Name:  ? Glyma.20G220800 Secondary Identifier:  ? PAC:30522515
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G220800 0.5kb upstream 0.5kb upstream 1526 true Chr20: 45581681-45583206 Glycine max
Glyma.20G220800 0.5kb upstream 0.5kb upstream 500 false Chr20: 45581681-45582180 Glycine max
Glyma.20G220800 0.5kb downstream 0.5kb downstream 1526 true Chr20: 45582181-45583706 Glycine max
Glyma.20G220800 0.5kb downstream 0.5kb downstream 500 false Chr20: 45583207-45583706 Glycine max
Glyma.20G220800 1.0kb upstream 1.0kb upstream 2026 true Chr20: 45581181-45583206 Glycine max
Glyma.20G220800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45581181-45582180 Glycine max
Glyma.20G220800 1.0kb downstream 1.0kb downstream 2026 true Chr20: 45582181-45584206 Glycine max
Glyma.20G220800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45583207-45584206 Glycine max
Glyma.20G220800 2.0kb upstream 2.0kb upstream 3026 true Chr20: 45580181-45583206 Glycine max
Glyma.20G220800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45580181-45582180 Glycine max
Glyma.20G220800 2.0kb downstream 2.0kb downstream 3026 true Chr20: 45582181-45585206 Glycine max
Glyma.20G220800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45583207-45585206 Glycine max
Glyma.20G220800 5.0kb upstream 5.0kb upstream 6026 true Chr20: 45577181-45583206 Glycine max
Glyma.20G220800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45577181-45582180 Glycine max
Glyma.20G220800 5.0kb downstream 5.0kb downstream 6026 true Chr20: 45582181-45588206 Glycine max
Glyma.20G220800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45583207-45588206 Glycine max
Glyma.20G220800 10.0kb upstream 10.0kb upstream 11026 true Chr20: 45572181-45583206 Glycine max
Glyma.20G220800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45572181-45582180 Glycine max
Glyma.20G220800 10.0kb downstream 10.0kb downstream 11026 true Chr20: 45582181-45593206 Glycine max
Glyma.20G220800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45583207-45593206 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.40066 0.0 25.4404    
cufflinks 0.325919 0.0 1.27563    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0286234 0.0 0.129549 Low Low
cufflinks 11.42 0.0 33.2271    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 32.204     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.317        
cufflinks 0.178        
cufflinks 0.078       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.199        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.555     High  
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 67.097     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.679     High  

0 Strain