Gene : Glyma.20G221800 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00072//PF01590 - Response regulator receiver domain (Response_reg) // GAF domain (GAF) Genomic Order:  2218
Name:  ? Glyma.20G221800 Secondary Identifier:  ? PAC:30521538
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G221800 0.5kb upstream 0.5kb upstream 5551 true Chr20: 45676289-45681839 Glycine max
Glyma.20G221800 0.5kb upstream 0.5kb upstream 500 false Chr20: 45676289-45676788 Glycine max
Glyma.20G221800 0.5kb downstream 0.5kb downstream 5551 true Chr20: 45676789-45682339 Glycine max
Glyma.20G221800 0.5kb downstream 0.5kb downstream 500 false Chr20: 45681840-45682339 Glycine max
Glyma.20G221800 1.0kb upstream 1.0kb upstream 6051 true Chr20: 45675789-45681839 Glycine max
Glyma.20G221800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45675789-45676788 Glycine max
Glyma.20G221800 1.0kb downstream 1.0kb downstream 6051 true Chr20: 45676789-45682839 Glycine max
Glyma.20G221800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45681840-45682839 Glycine max
Glyma.20G221800 2.0kb upstream 2.0kb upstream 7051 true Chr20: 45674789-45681839 Glycine max
Glyma.20G221800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45674789-45676788 Glycine max
Glyma.20G221800 2.0kb downstream 2.0kb downstream 7051 true Chr20: 45676789-45683839 Glycine max
Glyma.20G221800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45681840-45683839 Glycine max
Glyma.20G221800 5.0kb upstream 5.0kb upstream 10051 true Chr20: 45671789-45681839 Glycine max
Glyma.20G221800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45671789-45676788 Glycine max
Glyma.20G221800 5.0kb downstream 5.0kb downstream 10051 true Chr20: 45676789-45686839 Glycine max
Glyma.20G221800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45681840-45686839 Glycine max
Glyma.20G221800 10.0kb upstream 10.0kb upstream 15051 true Chr20: 45666789-45681839 Glycine max
Glyma.20G221800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45666789-45676788 Glycine max
Glyma.20G221800 10.0kb downstream 10.0kb downstream 15051 true Chr20: 45676789-45691839 Glycine max
Glyma.20G221800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45681840-45691839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314628 5265 Fabidae View MSA
124065160 5270 Rosid View MSA
123741292 5271 Pentapetalae View MSA
122795503 5272 Eudicot View MSA
122044609 5273 Angiosperm View MSA
121310320 5274 Embryophyte View MSA
123347836 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.52837 0.0 12.0238    
cufflinks 1.79088 0.0 5.63417   Low
cufflinks 5.19453 0.0 16.3261    
cufflinks 9.37486 0.0 35.5792   High
cufflinks 3.59583 0.0 12.2304    
cufflinks 4.04082 0.0 16.0007    
cufflinks 4.2571 0.0 13.9929    
cufflinks 6.30021 0.0 23.891    
cufflinks 6.67189 0.0 25.0554    
cufflinks 1.084        
cufflinks 0.755        
cufflinks 1.811       High
cufflinks 1.219        
cufflinks 1.269        
cufflinks 0.678        
cufflinks 0.862        
cufflinks 0.864        
cufflinks 2.164       High
cufflinks 0.68        
cufflinks 0.958        
cufflinks 0.545       Low
cufflinks 1.193        
cufflinks 0.928        
cufflinks 0.928        
cufflinks 0.857        
cufflinks 0.659       Low

0 Strain