Gene : Glyma.20G216000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11452//PTHR11452:SF33 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE Genomic Order:  2160
Name:  ? Glyma.20G216000 Secondary Identifier:  ? PAC:30521270
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1301 Glycine max pathologic  
Gmax PWY-6527 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G216000 0.5kb upstream 0.5kb upstream 6035 true Chr20: 45186998-45193032 Glycine max
Glyma.20G216000 0.5kb upstream 0.5kb upstream 500 false Chr20: 45192533-45193032 Glycine max
Glyma.20G216000 0.5kb downstream 0.5kb downstream 6035 true Chr20: 45186498-45192532 Glycine max
Glyma.20G216000 0.5kb downstream 0.5kb downstream 500 false Chr20: 45186498-45186997 Glycine max
Glyma.20G216000 1.0kb upstream 1.0kb upstream 6535 true Chr20: 45186998-45193532 Glycine max
Glyma.20G216000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45192533-45193532 Glycine max
Glyma.20G216000 1.0kb downstream 1.0kb downstream 6535 true Chr20: 45185998-45192532 Glycine max
Glyma.20G216000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45185998-45186997 Glycine max
Glyma.20G216000 2.0kb upstream 2.0kb upstream 7535 true Chr20: 45186998-45194532 Glycine max
Glyma.20G216000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45192533-45194532 Glycine max
Glyma.20G216000 2.0kb downstream 2.0kb downstream 7535 true Chr20: 45184998-45192532 Glycine max
Glyma.20G216000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45184998-45186997 Glycine max
Glyma.20G216000 5.0kb upstream 5.0kb upstream 10535 true Chr20: 45186998-45197532 Glycine max
Glyma.20G216000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45192533-45197532 Glycine max
Glyma.20G216000 5.0kb downstream 5.0kb downstream 10535 true Chr20: 45181998-45192532 Glycine max
Glyma.20G216000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45181998-45186997 Glycine max
Glyma.20G216000 10.0kb upstream 10.0kb upstream 15535 true Chr20: 45186998-45202532 Glycine max
Glyma.20G216000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45192533-45202532 Glycine max
Glyma.20G216000 10.0kb downstream 10.0kb downstream 15535 true Chr20: 45176998-45192532 Glycine max
Glyma.20G216000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45176998-45186997 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250407 5265 Fabidae View MSA
123993618 5270 Rosid View MSA
123568372 5271 Pentapetalae View MSA
122603117 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.060645 0.0 0.244562 Low  
cufflinks 0.119431 0.0 0.469862 Low  
cufflinks 0.495032 0.0 1.82684    
cufflinks 2.20251 0.0 7.13151   High
cufflinks 0.01038 0.0 0.0476875 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.4657 0.0 18.1739   High
cufflinks 0.0120258 0.0 0.0544283 Low Low
cufflinks 0.353667 0.0 1.3287    
cufflinks 0.035     Low  
cufflinks 0.007     Low Low
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.095        
cufflinks 0.069     Low  
cufflinks 0.01     Low Low
cufflinks 0.22       High
cufflinks 0.056     Low  
cufflinks 0.078     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low  
cufflinks 0.088     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain